Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC009950.2-201ENST00000636548 183 ntBASIC0.77□□□□□ -2.29
CACNA1EQ15878 RN7SKP158-201ENST00000410453 326 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC000111.3-201ENST00000433478 193 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 HSPE1P21-201ENST00000438283 308 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 RPL31P58-201ENST00000469001 379 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC026801.1-201ENST00000497178 464 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC022616.2-201ENST00000523185 300 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AP001330.4-201ENST00000604350 154 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC009318.4-201ENST00000620496 486 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
CACNA1EQ15878 ENSAP3-201ENST00000312710 333 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 RNU4-31P-201ENST00000384211 141 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 MIR150-201ENST00000385048 84 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 RNA5SP511-201ENST00000410487 115 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AL590623.1-201ENST00000427864 105 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CACNA1EQ15878 TPTE2P6-202ENST00000445572 1007 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AL050341.1-201ENST00000447743 313 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 snoU109.1-201ENST00000459339 135 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 FAM60BP-201ENST00000578364 658 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC025588.3-201ENST00000604182 274 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC138473.1-201ENST00000605717 526 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC096586.1-201ENST00000610267 561 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC243829.6-201ENST00000612652 106 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC004852.3-201ENST00000614131 326 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 AC090116.1-201ENST00000615679 446 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 AL356585.4-201ENST00000623078 1229 ntBASIC0.76□□□□□ -2.29
CACNA1EQ15878 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
CACNA1EQ15878 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CACNA1EQ15878 RNU6-252P-201ENST00000363232 107 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 RNU6-891P-201ENST00000384280 111 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 Y_RNA.549-201ENST00000384657 102 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 U8.14-201ENST00000390843 143 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC068050.1-201ENST00000394891 380 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 RNU6-712P-201ENST00000410558 100 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 MTCO1P57-201ENST00000432182 261 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AL034418.1-201ENST00000448675 860 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC015724.1-201ENST00000478577 156 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC067942.3-201ENST00000512025 362 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC112198.4-201ENST00000515450 351 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 RNU6-970P-201ENST00000516312 107 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 RNU6-928P-201ENST00000516876 104 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC006213.4-201ENST00000616184 634 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC073592.7-201ENST00000623659 507 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 U6.101-201ENST00000637707 76 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AL513185.3-201ENST00000433335 1300 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CACNA1EQ15878 RNU6-730P-201ENST00000383954 104 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 SSXP10-201ENST00000402595 565 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 RPL23AP3-201ENST00000453844 468 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 AL359385.1-201ENST00000456509 365 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC117454.1-201ENST00000491120 168 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 RNU6-885P-201ENST00000516607 104 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 SCARNA11.3-201ENST00000517276 130 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC087465.1-201ENST00000560574 245 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 MIR5571-201ENST00000577998 113 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 MIR4711-201ENST00000578274 70 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.75□□□□□ -2.29
CACNA1EQ15878 AL050343.2-201ENST00000607338 280 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AC073569.3-201ENST00000619055 682 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 AP006248.3-201ENST00000623580 594 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 OR5H6-203ENST00000642105 978 ntBASIC0.75□□□□□ -2.29
CACNA1EQ15878 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
CACNA1EQ15878 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.74□□□□□ -2.29
CACNA1EQ15878 EIF4EP4-201ENST00000424916 578 ntBASIC0.74□□□□□ -2.29
CACNA1EQ15878 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.74□□□□□ -2.29
CACNA1EQ15878 FO393419.3-201ENST00000428741 282 ntBASIC0.74□□□□□ -2.29
CACNA1EQ15878 AL357134.1-201ENST00000445848 426 ntBASIC0.74□□□□□ -2.29
CACNA1EQ15878 RPL9P9-202ENST00000466501 579 ntBASIC0.74□□□□□ -2.29
CACNA1EQ15878 RPS27P23-201ENST00000487608 251 ntBASIC0.74□□□□□ -2.29
CACNA1EQ15878 AC008562.1-201ENST00000521763 330 ntBASIC0.74□□□□□ -2.29
CACNA1EQ15878 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.74□□□□□ -2.29
CACNA1EQ15878 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms