Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC005261.5-201ENST00000596280 355 ntBASIC2.25□□□□□ -2.05
RAB40BQ12829 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40BQ12829 Z99289.3-201ENST00000605586 594 ntBASIC2.25□□□□□ -2.05
RAB40BQ12829 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.25□□□□□ -2.05
RAB40BQ12829 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RAB40BQ12829 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40BQ12829 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.24□□□□□ -2.05
RAB40BQ12829 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RAB40BQ12829 SNORD56.2-201ENST00000363242 71 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 RNU6-7-201ENST00000364784 107 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 RNU6-8-201ENST00000365467 107 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 SNORA41-201ENST00000384675 132 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 RNU6-1328P-201ENST00000410938 106 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AL592148.1-201ENST00000413568 445 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AC092809.3-201ENST00000415453 231 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40BQ12829 COTL1P1-201ENST00000422309 375 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.24□□□□□ -2.05
RAB40BQ12829 AC007283.2-201ENST00000424739 197 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AL589872.1-201ENST00000426602 288 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40BQ12829 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40BQ12829 MTCO2P29-201ENST00000465212 189 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AL121769.1-201ENST00000469473 401 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 AC007182.2-201ENST00000489251 402 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40BQ12829 AIG1P1-201ENST00000503376 148 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 SNORA31.6-201ENST00000516241 130 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 RNU6-914P-201ENST00000516749 109 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 BTF3P12-201ENST00000519620 469 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AP003467.2-201ENST00000520175 319 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 AP003122.4-201ENST00000530980 758 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40BQ12829 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.24□□□□□ -2.05
RAB40BQ12829 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.24□□□□□ -2.05
RAB40BQ12829 MIR4782-201ENST00000577987 79 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RAB40BQ12829 MIR548AB-201ENST00000584917 84 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 HMGN1P30-201ENST00000589286 268 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AL356280.1-201ENST00000603614 379 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 AC012360.2-201ENST00000609349 391 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.24□□□□□ -2.05
RAB40BQ12829 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.24□□□□□ -2.05
RAB40BQ12829 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.24□□□□□ -2.05
RAB40BQ12829 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
RAB40BQ12829 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC080128.1-201ENST00000474389 1917 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
RAB40BQ12829 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB40BQ12829 RNU4-1-201ENST00000363925 141 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 Y_RNA.534-201ENST00000384599 112 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 Y_RNA.598-201ENST00000410480 95 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 ELOCP4-201ENST00000420090 333 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40BQ12829 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB40BQ12829 USP9YP15-201ENST00000442391 422 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 BRK1P2-201ENST00000442875 223 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40BQ12829 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC109486.1-201ENST00000486833 374 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AC080014.1-201ENST00000496877 1201 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 FABP5P5-201ENST00000515537 406 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 RNU6-572P-201ENST00000516724 80 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 RNU6-1315P-201ENST00000517187 99 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC009902.1-201ENST00000519351 183 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.23□□□□□ -2.05
RAB40BQ12829 RPL21P5-201ENST00000554662 472 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.23□□□□□ -2.05
RAB40BQ12829 LARP7P3-201ENST00000579888 337 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 MIR3616-201ENST00000584070 92 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC012065.4-201ENST00000602445 679 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AC007938.3-201ENST00000604965 623 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AP002360.4-201ENST00000606980 481 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AP000770.2-201ENST00000623694 100 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AC007494.3-201ENST00000624660 743 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.23□□□□□ -2.05
RAB40BQ12829 PISRT1-201ENST00000626175 531 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AL137790.1-201ENST00000634283 177 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 AC099654.13-201ENST00000639774 207 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RAB40BQ12829 AC010329.5-201ENST00000623497 2174 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 MTND4P4-201ENST00000439033 1366 ntBASIC2.23□□□□□ -2.05
RAB40BQ12829 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RAB40BQ12829 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RAB40BQ12829 AC004944.1-201ENST00000517807 3059 ntBASIC2.22□□□□□ -2.05
RAB40BQ12829 AC073343.1-201ENST00000328239 651 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms