Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH1Q08174 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH1Q08174 Y_RNA.16-201ENST00000362421 102 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 RNU1-94P-201ENST00000362627 173 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 RNU6-1266P-201ENST00000362794 105 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 RNU6-336P-201ENST00000364891 107 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDH1Q08174 RNU6-741P-201ENST00000383889 107 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 RNA5SP146-201ENST00000410743 123 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 RPL27AP8-201ENST00000424277 446 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDH1Q08174 AL392103.1-201ENST00000447000 198 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 AL138752.1-201ENST00000452964 351 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 ANP32BP2-201ENST00000454525 545 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 AC092798.1-201ENST00000458542 409 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 HMGB1P22-201ENST00000505315 124 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDH1Q08174 AL110118.1-201ENST00000553543 400 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 MIR4436B2-201ENST00000581415 91 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 MIR4436B1-201ENST00000583272 91 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 RPL7P50-201ENST00000600588 727 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 AC091979.2-201ENST00000607514 214 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 AP002826.1-201ENST00000608835 315 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 U4.7-201ENST00000638126 106 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 AL356489.2-201ENST00000566968 3528 ntBASIC4.52□□□□□ -1.69
PCDH1Q08174 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH1Q08174 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH1Q08174 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH1Q08174 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDH1Q08174 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH1Q08174 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDH1Q08174 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PCDH1Q08174 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH1Q08174 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH1Q08174 AC010300.1-201ENST00000600671 5134 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH1Q08174 AL157777.2-201ENST00000258070 137 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PCDH1Q08174 Y_RNA.200-201ENST00000364018 102 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 Y_RNA.269-201ENST00000364685 89 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 Y_RNA.581-201ENST00000391017 97 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 AL139156.1-201ENST00000412785 841 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 AC140479.3-201ENST00000418944 1126 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 Z74021.1-201ENST00000423610 407 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 AC005154.2-201ENST00000438110 379 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDH1Q08174 PIGFP3-201ENST00000441918 722 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 U8.22-201ENST00000459141 133 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 RPL23AP65-201ENST00000475608 468 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 KC877373.1-201ENST00000479066 408 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 RPL36AP41-201ENST00000493820 306 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH1Q08174 RNA5SP446-201ENST00000515955 82 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 RN7SKP276-201ENST00000516242 268 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 RNA5SP165-201ENST00000517142 115 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 RNA5SP291-201ENST00000517222 105 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH1Q08174 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDH1Q08174 SNRPGP15-201ENST00000600149 222 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.51□□□□□ -1.69
PCDH1Q08174 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH1Q08174 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDH1Q08174 AL359693.1-201ENST00000614959 2407 ntBASIC4.51□□□□□ -1.69
PCDH1Q08174 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH1Q08174 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PCDH1Q08174 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PCDH1Q08174 RNA5SP87-201ENST00000384155 118 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 Y_RNA.541-201ENST00000384640 113 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCDH1Q08174 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCDH1Q08174 RNU1-82P-201ENST00000390851 165 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 SDHCP2-201ENST00000398565 501 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 RPL21P40-201ENST00000428586 483 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 RPS6P12-201ENST00000432491 726 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH1Q08174 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDH1Q08174 AL136097.1-201ENST00000456945 913 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 snoU13.24-201ENST00000458998 104 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 RPL7AP28-201ENST00000464513 571 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 RN7SL817P-201ENST00000480777 288 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH1Q08174 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH1Q08174 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDH1Q08174 RPL21P7-201ENST00000557463 483 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH1Q08174 MIR3667-201ENST00000581025 74 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 AC060766.3-201ENST00000591442 263 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 MIR6820-201ENST00000611508 62 ntBASIC4.5□□□□□ -1.69
PCDH1Q08174 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.5□□□□□ -1.69
PCDH1Q08174 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH1Q08174 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms