Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.2□□□□□ -1.9
LTBQ06643 RPL21P93-201ENST00000480465 489 ntBASIC3.2□□□□□ -1.9
LTBQ06643 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LTBQ06643 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.2□□□□□ -1.9
LTBQ06643 AC098591.2-201ENST00000510152 315 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.2□□□□□ -1.9
LTBQ06643 RNU6-1095P-201ENST00000516148 108 ntBASIC3.2□□□□□ -1.9
LTBQ06643 RNU6-1088P-201ENST00000516850 104 ntBASIC3.2□□□□□ -1.9
LTBQ06643 HMGN1P28-201ENST00000521340 364 ntBASIC3.2□□□□□ -1.9
LTBQ06643 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.2□□□□□ -1.9
LTBQ06643 AL137161.1-201ENST00000532231 390 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
LTBQ06643 TGIF1P1-201ENST00000558095 802 ntBASIC3.2□□□□□ -1.9
LTBQ06643 FRG2DP-202ENST00000566967 323 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC093249.1-201ENST00000567049 203 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.2□□□□□ -1.9
LTBQ06643 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.2□□□□□ -1.9
LTBQ06643 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.2□□□□□ -1.9
LTBQ06643 AL670379.11-201ENST00000604059 253 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL670379.10-201ENST00000604330 253 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL670379.12-201ENST00000605291 253 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL670379.9-201ENST00000605428 253 ntBASIC3.2□□□□□ -1.9
LTBQ06643 HMGN2P28-201ENST00000606102 262 ntBASIC3.2□□□□□ -1.9
LTBQ06643 Z82243.1-201ENST00000609432 473 ntBASIC3.2□□□□□ -1.9
LTBQ06643 DUSP12P1-201ENST00000612874 516 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL450472.3-201ENST00000615578 367 ntBASIC3.2□□□□□ -1.9
LTBQ06643 SNHG22-203ENST00000617833 660 ntBASIC3.2□□□□□ -1.9
LTBQ06643 uc_338.11-201ENST00000619132 160 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AC022149.2-201ENST00000621061 203 ntBASIC3.2□□□□□ -1.9
LTBQ06643 AL359757.2-201ENST00000624309 274 ntBASIC3.2□□□□□ -1.9
LTBQ06643 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LTBQ06643 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LTBQ06643 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LTBQ06643 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.2□□□□□ -1.9
LTBQ06643 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
LTBQ06643 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LTBQ06643 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
LTBQ06643 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LTBQ06643 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LTBQ06643 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LTBQ06643 RNU6-1252P-201ENST00000363054 104 ntBASIC3.19□□□□□ -1.9
LTBQ06643 Y_RNA.530-201ENST00000384587 101 ntBASIC3.19□□□□□ -1.9
LTBQ06643 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LTBQ06643 Y_RNA.579-201ENST00000390939 94 ntBASIC3.19□□□□□ -1.9
LTBQ06643 RNU6-550P-201ENST00000391057 101 ntBASIC3.19□□□□□ -1.9
LTBQ06643 ATP5A1P2-201ENST00000412323 255 ntBASIC3.19□□□□□ -1.9
LTBQ06643 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.19□□□□□ -1.9
LTBQ06643 AC236972.2-201ENST00000434979 310 ntBASIC3.19□□□□□ -1.9
LTBQ06643 MTCO3P45-201ENST00000443036 613 ntBASIC3.19□□□□□ -1.9
LTBQ06643 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.19□□□□□ -1.9
LTBQ06643 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.19□□□□□ -1.9
LTBQ06643 AP001086.1-201ENST00000494882 321 ntBASIC3.19□□□□□ -1.9
LTBQ06643 Y_RNA.682-201ENST00000516457 100 ntBASIC3.19□□□□□ -1.9
LTBQ06643 RNU6-273P-201ENST00000516937 96 ntBASIC3.19□□□□□ -1.9
LTBQ06643 AC103783.1-201ENST00000520506 373 ntBASIC3.19□□□□□ -1.9
LTBQ06643 NDUFB9P3-201ENST00000521269 501 ntBASIC3.19□□□□□ -1.9
LTBQ06643 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.19□□□□□ -1.9
LTBQ06643 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.19□□□□□ -1.9
LTBQ06643 AC007458.1-201ENST00000542812 373 ntBASIC3.19□□□□□ -1.9
LTBQ06643 AC126177.3-201ENST00000551839 688 ntBASIC3.19□□□□□ -1.9
LTBQ06643 AC010653.1-201ENST00000571108 881 ntBASIC3.19□□□□□ -1.9
LTBQ06643 AL022345.1-201ENST00000607292 135 ntBASIC3.19□□□□□ -1.9
LTBQ06643 MIR6715A-201ENST00000615929 79 ntBASIC3.19□□□□□ -1.9
LTBQ06643 AL589994.2-201ENST00000621124 579 ntBASIC3.19□□□□□ -1.9
LTBQ06643 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
LTBQ06643 MTND4LP32-201ENST00000636111 270 ntBASIC3.19□□□□□ -1.9
LTBQ06643 GABPAP-201ENST00000419271 1356 ntBASIC3.19□□□□□ -1.9
LTBQ06643 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LTBQ06643 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LTBQ06643 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LTBQ06643 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LTBQ06643 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
LTBQ06643 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LTBQ06643 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LTBQ06643 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.18□□□□□ -1.9
LTBQ06643 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.18□□□□□ -1.9
LTBQ06643 AL133383.2-201ENST00000622958 2336 ntBASIC3.18□□□□□ -1.9
LTBQ06643 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LTBQ06643 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.18□□□□□ -1.9
LTBQ06643 RNU6-1249P-201ENST00000363237 111 ntBASIC3.18□□□□□ -1.9
LTBQ06643 RNU6-1155P-201ENST00000363554 107 ntBASIC3.18□□□□□ -1.9
LTBQ06643 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LTBQ06643 RNU6-946P-201ENST00000383878 107 ntBASIC3.18□□□□□ -1.9
LTBQ06643 RNU6-701P-201ENST00000384059 107 ntBASIC3.18□□□□□ -1.9
LTBQ06643 RNU6-43P-201ENST00000384302 107 ntBASIC3.18□□□□□ -1.9
LTBQ06643 MIR607-201ENST00000385241 96 ntBASIC3.18□□□□□ -1.9
LTBQ06643 UBA52P6-201ENST00000399822 382 ntBASIC3.18□□□□□ -1.9
LTBQ06643 RNU6-712P-201ENST00000410558 100 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.18□□□□□ -1.9
LTBQ06643 ARL5AP1-201ENST00000418991 388 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AC099677.1-201ENST00000420575 175 ntBASIC3.18□□□□□ -1.9
LTBQ06643 RAC1P6-201ENST00000423911 575 ntBASIC3.18□□□□□ -1.9
LTBQ06643 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.18□□□□□ -1.9
LTBQ06643 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.18□□□□□ -1.9
LTBQ06643 NDUFA5P4-201ENST00000436704 385 ntBASIC3.18□□□□□ -1.9
LTBQ06643 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.18□□□□□ -1.9
LTBQ06643 HMGN2P7-201ENST00000456186 273 ntBASIC3.18□□□□□ -1.9
LTBQ06643 RPL23AP14-201ENST00000468281 468 ntBASIC3.18□□□□□ -1.9
LTBQ06643 VN1R17P-201ENST00000472048 1090 ntBASIC3.18□□□□□ -1.9
LTBQ06643 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms