Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC108059.3-201ENST00000456388 214 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 MRPS17P3-201ENST00000465453 385 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC004263.1-201ENST00000479327 332 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 RPL23AP41-201ENST00000484754 458 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 RPF2P2-201ENST00000504693 896 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 RNU6-759P-201ENST00000516740 103 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 Y_RNA.717-201ENST00000517106 92 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 RN7SKP258-201ENST00000517151 304 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC107934.1-201ENST00000522215 217 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC008015.1-201ENST00000555505 465 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 ZNF519P3-201ENST00000557158 1032 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 PCMTD1P2-201ENST00000565017 355 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC023824.2-201ENST00000566185 400 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC009127.3-201ENST00000570531 403 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 RPS15AP11-201ENST00000594193 385 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 KC877982.1-201ENST00000602313 470 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AP000860.1-201ENST00000605250 559 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 Z99289.3-201ENST00000605586 594 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC135507.1-201ENST00000607214 561 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC063944.3-201ENST00000609969 533 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC103710.1-201ENST00000610003 901 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC004223.4-201ENST00000612426 332 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC090970.3-201ENST00000612566 866 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC104010.1-201ENST00000616889 150 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC068057.2-201ENST00000624047 895 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 CU459211.1-201ENST00000635667 749 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 AC006927.3-201ENST00000638789 384 ntBASIC2.11□□□□□ -2.07
HMGCS1Q01581 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 RNY4P24-201ENST00000362735 96 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RNU6-1167P-201ENST00000363227 94 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RNU6-501P-201ENST00000364072 100 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RNY4P16-201ENST00000364768 94 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RNU6-701P-201ENST00000384059 107 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 Y_RNA.560-201ENST00000384689 102 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RNA5SP508-201ENST00000411327 119 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 USP9YP13-201ENST00000417797 480 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 ELOCP14-201ENST00000428070 331 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 MTND1P28-201ENST00000435623 950 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 ELOCP7-201ENST00000439968 331 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RPL23AP49-201ENST00000492925 468 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC008413.1-201ENST00000511864 177 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 SCARNA17.1-201ENST00000516211 143 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 SCARNA17.2-201ENST00000516334 143 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RNU6-201P-201ENST00000517100 61 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 IGLV3-17-201ENST00000519099 244 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 SNORD53-201ENST00000579969 78 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 MIR3118-1-201ENST00000581787 76 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC098826.3-201ENST00000603823 466 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC004805.2-201ENST00000605382 482 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC107294.1-201ENST00000609524 467 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AL355816.2-201ENST00000610049 647 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 SCARNA17.4-201ENST00000614296 143 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AC027807.2-201ENST00000616099 408 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 AL590808.1-201ENST00000618696 141 ntBASIC2.1□□□□□ -2.07
HMGCS1Q01581 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
HMGCS1Q01581 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 CKAP2P1-201ENST00000555477 2049 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 RNU6-1284P-201ENST00000363701 100 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 RNU6-512P-201ENST00000364438 103 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 Y_RNA.245-201ENST00000364493 95 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 RNU6-533P-201ENST00000384144 107 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 RNU6-14P-201ENST00000384630 106 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 NDUFS5P1-201ENST00000405668 289 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AL353777.1-201ENST00000425552 326 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC093106.2-201ENST00000428212 385 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 SNRPEP9-201ENST00000436794 238 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 RPL22P17-201ENST00000438729 315 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC013267.1-201ENST00000458227 267 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 SCARNA11.3-201ENST00000517276 130 ntBASIC2.09□□□□□ -2.07
HMGCS1Q01581 AC022616.6-201ENST00000520479 119 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms