Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 DUSP12P1-201ENST00000612874 516 ntBASIC2.91□□□□□ -1.94
CDK3Q00526 AL158209.2-201ENST00000619266 216 ntBASIC2.91□□□□□ -1.94
CDK3Q00526 SNORA50A-202ENST00000629536 136 ntBASIC2.91□□□□□ -1.94
CDK3Q00526 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.91□□□□□ -1.94
CDK3Q00526 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDK3Q00526 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CDK3Q00526 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.9□□□□□ -1.94
CDK3Q00526 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDK3Q00526 RNU6-1120P-201ENST00000362988 108 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 SNORA80A-201ENST00000363922 136 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 SNORD115-7-201ENST00000365306 82 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 SNORA9.2-201ENST00000365361 133 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 RNU4-48P-201ENST00000365559 182 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 SNORA4.3-201ENST00000365564 137 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 CD24P4-201ENST00000382840 243 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 RNU6-851P-201ENST00000384565 107 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 Y_RNA.576-201ENST00000384781 102 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 MIR301A-201ENST00000385261 86 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CDK3Q00526 AL122016.1-201ENST00000403365 367 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 MTCO2P19-201ENST00000427513 598 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.9□□□□□ -1.95
CDK3Q00526 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK3Q00526 AL591704.1-201ENST00000432574 275 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 RPL37P4-201ENST00000448908 268 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 RPL26P9-201ENST00000457466 433 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 RPS29P15-201ENST00000458329 171 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 RNU7-182P-201ENST00000459009 62 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AC006512.1-201ENST00000468816 291 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AC126182.1-201ENST00000478134 357 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.9□□□□□ -1.95
CDK3Q00526 SNORA31.21-201ENST00000517180 77 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AC068657.1-201ENST00000520807 306 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 IGHV3-76-201ENST00000522465 295 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK3Q00526 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDK3Q00526 RANP3-201ENST00000530970 276 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDK3Q00526 HMGN2P15-201ENST00000585707 270 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AL670379.4-201ENST00000605279 254 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 AP003122.6-201ENST00000623831 495 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 SEPT14P19-203ENST00000633205 211 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDK3Q00526 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.9□□□□□ -1.95
CDK3Q00526 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDK3Q00526 ZNF680P1-201ENST00000436625 1469 ntBASIC2.9□□□□□ -1.95
CDK3Q00526 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDK3Q00526 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDK3Q00526 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK3Q00526 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.89□□□□□ -1.95
CDK3Q00526 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK3Q00526 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK3Q00526 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDK3Q00526 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDK3Q00526 Y_RNA.41-201ENST00000362646 102 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDK3Q00526 U3.26-201ENST00000391236 204 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 RNU6-387P-201ENST00000411331 105 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 RNA5SP111-201ENST00000411386 101 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 USP9YP6-201ENST00000413550 854 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK3Q00526 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK3Q00526 DNAJC19P4-201ENST00000440115 345 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 DPPA3P1-201ENST00000448050 469 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK3Q00526 RNU7-23P-201ENST00000459465 62 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC096576.1-201ENST00000489014 359 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 RPL9P6-201ENST00000492764 598 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.89□□□□□ -1.95
CDK3Q00526 AC104806.1-201ENST00000508720 308 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.89□□□□□ -1.95
CDK3Q00526 RNU1-103P-201ENST00000516502 125 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AP003122.3-201ENST00000526316 255 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.89□□□□□ -1.95
CDK3Q00526 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.89□□□□□ -1.95
CDK3Q00526 AC084851.1-201ENST00000529105 249 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK3Q00526 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDK3Q00526 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK3Q00526 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
CDK3Q00526 AL359212.1-201ENST00000556608 614 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.89□□□□□ -1.95
CDK3Q00526 MIR4775-201ENST00000581168 75 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.89□□□□□ -1.95
CDK3Q00526 AL033523.1-201ENST00000605153 153 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC126118.1-201ENST00000607744 628 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC087241.4-201ENST00000612441 480 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CDK3Q00526 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.89□□□□□ -1.95
CDK3Q00526 MIR6863-201ENST00000636112 90 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC004972.1-201ENST00000623934 2209 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CDK3Q00526 MTND5P7-201ENST00000413558 1798 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CDK3Q00526 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
CDK3Q00526 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms