Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.59□□□□□ -1.83
NKX6-1P78426 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX6-1P78426 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX6-1P78426 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX6-1P78426 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NKX6-1P78426 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
NKX6-1P78426 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
NKX6-1P78426 AC010733.2-201ENST00000589496 5702 ntBASIC3.59□□□□□ -1.84
NKX6-1P78426 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.59□□□□□ -1.84
NKX6-1P78426 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
NKX6-1P78426 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX6-1P78426 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NKX6-1P78426 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NKX6-1P78426 RNU6-562P-201ENST00000362731 107 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 RNA5SP322-201ENST00000363617 119 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 RNU6-884P-201ENST00000363889 107 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 SNORD14B-201ENST00000364533 90 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX6-1P78426 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NKX6-1P78426 RNU6-658P-201ENST00000384606 106 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NKX6-1P78426 MIR1183-201ENST00000408856 89 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX6-1P78426 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX6-1P78426 AL353729.1-201ENST00000425044 720 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX6-1P78426 RPL32P28-201ENST00000443577 397 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 SSXP4-201ENST00000451349 245 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 PRSS3P4-201ENST00000453323 162 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 AC026801.1-201ENST00000497178 464 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.58□□□□□ -1.84
NKX6-1P78426 RNU6-703P-201ENST00000516946 107 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 TRMT10BP1-201ENST00000519377 943 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 NACAP3-201ENST00000552100 481 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 AL355375.2-201ENST00000574825 175 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.58□□□□□ -1.84
NKX6-1P78426 AL161756.2-201ENST00000604597 246 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 APOOP1-201ENST00000604695 592 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 AC113139.1-201ENST00000605049 239 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX6-1P78426 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX6-1P78426 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX6-1P78426 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 AC012442.3-202ENST00000636742 206 ntBASIC3.58□□□□□ -1.84
NKX6-1P78426 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX6-1P78426 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX6-1P78426 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
NKX6-1P78426 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX6-1P78426 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
NKX6-1P78426 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX6-1P78426 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX6-1P78426 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.58□□□□□ -1.84
NKX6-1P78426 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX6-1P78426 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX6-1P78426 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX6-1P78426 RNU1-73P-201ENST00000383971 164 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 RPL5P18-201ENST00000406671 891 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 NDUFS5P4-201ENST00000412983 318 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 PGBD4P6-201ENST00000421501 610 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.57□□□□□ -1.84
NKX6-1P78426 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 ZNF962P-201ENST00000443465 3140 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AL500522.2-201ENST00000448562 343 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX6-1P78426 AC104472.2-201ENST00000469035 601 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AC128713.1-201ENST00000471495 306 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NKX6-1P78426 UBE2CP3-201ENST00000502715 450 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.57□□□□□ -1.84
NKX6-1P78426 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.57□□□□□ -1.84
NKX6-1P78426 AC063950.1-201ENST00000552036 308 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.57□□□□□ -1.84
NKX6-1P78426 AC120057.2-201ENST00000571520 271 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AC100830.2-201ENST00000581636 240 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 HSPE1P7-201ENST00000604681 321 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 SNORA51-201ENST00000606420 132 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NKX6-1P78426 FAM157A-202ENST00000615155 405 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AL138880.2-201ENST00000616214 239 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AC084757.4-201ENST00000616350 526 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 AC006111.3-201ENST00000622137 383 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 MIR6500-201ENST00000622700 86 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NKX6-1P78426 AC007656.2-201ENST00000624902 4547 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NKX6-1P78426 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX6-1P78426 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX6-1P78426 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
NKX6-1P78426 AC007256.1-201ENST00000392253 2765 ntBASIC3.57□□□□□ -1.84
NKX6-1P78426 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NKX6-1P78426 SRP72P2-201ENST00000344851 1979 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 MTND5P7-201ENST00000413558 1798 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.56□□□□□ -1.84
NKX6-1P78426 MAPK10-253ENST00000641010 4072 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 RPS4XP5-202ENST00000449995 1334 ntBASIC3.56□□□□□ -1.84
NKX6-1P78426 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NKX6-1P78426 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms