Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Y_RNA.474-201ENST00000384341 102 ntBASIC3.34□□□□□ -1.87
RAE1P78406 SNORA57.1-201ENST00000391227 145 ntBASIC3.34□□□□□ -1.87
RAE1P78406 MIR1193-201ENST00000408109 78 ntBASIC3.34□□□□□ -1.87
RAE1P78406 AL353621.1-201ENST00000418219 243 ntBASIC3.34□□□□□ -1.87
RAE1P78406 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
RAE1P78406 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.34□□□□□ -1.87
RAE1P78406 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.34□□□□□ -1.87
RAE1P78406 RPL23AP69-201ENST00000431134 458 ntBASIC3.34□□□□□ -1.87
RAE1P78406 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.34□□□□□ -1.87
RAE1P78406 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.34□□□□□ -1.87
RAE1P78406 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.34□□□□□ -1.87
RAE1P78406 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.34□□□□□ -1.87
RAE1P78406 AC117503.1-201ENST00000472241 394 ntBASIC3.34□□□□□ -1.87
RAE1P78406 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.34□□□□□ -1.87
RAE1P78406 RPL7P43-201ENST00000478876 753 ntBASIC3.34□□□□□ -1.87
RAE1P78406 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.34□□□□□ -1.87
RAE1P78406 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.34□□□□□ -1.87
RAE1P78406 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.34□□□□□ -1.87
RAE1P78406 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.34□□□□□ -1.87
RAE1P78406 AC093027.1-201ENST00000546698 429 ntBASIC3.34□□□□□ -1.87
RAE1P78406 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.34□□□□□ -1.87
RAE1P78406 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.34□□□□□ -1.87
RAE1P78406 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.34□□□□□ -1.87
RAE1P78406 MIR5692C1-201ENST00000585309 91 ntBASIC3.34□□□□□ -1.87
RAE1P78406 AC023043.2-201ENST00000589678 1026 ntBASIC3.34□□□□□ -1.87
RAE1P78406 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.34□□□□□ -1.87
RAE1P78406 AC136601.2-201ENST00000604356 474 ntBASIC3.34□□□□□ -1.87
RAE1P78406 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RAE1P78406 RMST_4.1-201ENST00000616886 107 ntBASIC3.34□□□□□ -1.87
RAE1P78406 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAE1P78406 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RAE1P78406 AC022336.2-201ENST00000568966 2538 ntBASIC3.34□□□□□ -1.88
RAE1P78406 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
RAE1P78406 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 MFSD8-233ENST00000641482 4860 ntBASIC3.33□□□□□ -1.88
RAE1P78406 OTUD4P1-201ENST00000237841 3067 ntBASIC3.33□□□□□ -1.88
RAE1P78406 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 RNU6-1252P-201ENST00000363054 104 ntBASIC3.33□□□□□ -1.88
RAE1P78406 Y_RNA.135-201ENST00000363439 95 ntBASIC3.33□□□□□ -1.88
RAE1P78406 RNU6-266P-201ENST00000364225 107 ntBASIC3.33□□□□□ -1.88
RAE1P78406 RNU4-76P-201ENST00000364509 141 ntBASIC3.33□□□□□ -1.88
RAE1P78406 RNU6-1303P-201ENST00000364841 107 ntBASIC3.33□□□□□ -1.88
RAE1P78406 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.33□□□□□ -1.88
RAE1P78406 MIR184-201ENST00000384962 84 ntBASIC3.33□□□□□ -1.88
RAE1P78406 RPL21P17-201ENST00000397467 475 ntBASIC3.33□□□□□ -1.88
RAE1P78406 MIR1183-201ENST00000408856 89 ntBASIC3.33□□□□□ -1.88
RAE1P78406 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 RNU6-1025P-201ENST00000410629 104 ntBASIC3.33□□□□□ -1.88
RAE1P78406 RNU6-607P-201ENST00000411283 108 ntBASIC3.33□□□□□ -1.88
RAE1P78406 CYCSP19-201ENST00000411715 316 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.33□□□□□ -1.88
RAE1P78406 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.33□□□□□ -1.88
RAE1P78406 AC092047.1-201ENST00000424997 240 ntBASIC3.33□□□□□ -1.88
RAE1P78406 MYL8P-204ENST00000431574 518 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AL512844.2-201ENST00000433990 593 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
RAE1P78406 SNRPGP3-201ENST00000469405 227 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AC068587.1-201ENST00000483613 781 ntBASIC3.33□□□□□ -1.88
RAE1P78406 HMGB1P30-201ENST00000492455 606 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AC022493.1-201ENST00000492984 337 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.33□□□□□ -1.88
RAE1P78406 MTND3P25-201ENST00000509243 135 ntBASIC3.33□□□□□ -1.88
RAE1P78406 TBCAP3-201ENST00000512475 312 ntBASIC3.33□□□□□ -1.88
RAE1P78406 SNORA25.17-201ENST00000517184 124 ntBASIC3.33□□□□□ -1.88
RAE1P78406 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.33□□□□□ -1.88
RAE1P78406 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.33□□□□□ -1.88
RAE1P78406 TGIF1P1-201ENST00000558095 802 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AL355375.2-201ENST00000574825 175 ntBASIC3.33□□□□□ -1.88
RAE1P78406 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.33□□□□□ -1.88
RAE1P78406 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
RAE1P78406 uc_338.15-201ENST00000615470 191 ntBASIC3.33□□□□□ -1.88
RAE1P78406 U7.8-201ENST00000619968 63 ntBASIC3.33□□□□□ -1.88
RAE1P78406 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RAE1P78406 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.33□□□□□ -1.88
RAE1P78406 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.33□□□□□ -1.88
RAE1P78406 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAE1P78406 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RAE1P78406 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAE1P78406 AF127577.6-201ENST00000623352 2191 ntBASIC3.32□□□□□ -1.88
RAE1P78406 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAE1P78406 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAE1P78406 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RAE1P78406 SNORD6-201ENST00000365444 73 ntBASIC3.32□□□□□ -1.88
RAE1P78406 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RAE1P78406 SNORA75B-201ENST00000384053 137 ntBASIC3.32□□□□□ -1.88
RAE1P78406 RNU6-1179P-201ENST00000384667 107 ntBASIC3.32□□□□□ -1.88
RAE1P78406 RPS20P15-201ENST00000412792 311 ntBASIC3.32□□□□□ -1.88
RAE1P78406 SYF2P2-201ENST00000417620 583 ntBASIC3.32□□□□□ -1.88
RAE1P78406 UBE2D3P2-201ENST00000424409 445 ntBASIC3.32□□□□□ -1.88
RAE1P78406 AP000907.1-201ENST00000428428 510 ntBASIC3.32□□□□□ -1.88
RAE1P78406 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.32□□□□□ -1.88
RAE1P78406 AC005019.1-201ENST00000436455 431 ntBASIC3.32□□□□□ -1.88
RAE1P78406 CECR9-201ENST00000453421 199 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms