Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN20P56880 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 MIR4801-201ENST00000582704 82 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.99□□□□□ -1.93
CLDN20P56880 AC136601.2-201ENST00000604356 474 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AL670379.4-201ENST00000605279 254 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 AC008962.1-201ENST00000605729 304 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 AC024940.5-201ENST00000622889 474 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.99□□□□□ -1.93
CLDN20P56880 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.99□□□□□ -1.93
CLDN20P56880 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN20P56880 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.99□□□□□ -1.93
CLDN20P56880 AC005183.1-201ENST00000603687 1979 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN20P56880 AL359693.1-201ENST00000614959 2407 ntBASIC2.99□□□□□ -1.93
CLDN20P56880 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CLDN20P56880 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN20P56880 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN20P56880 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLDN20P56880 AL136164.4-201ENST00000625013 2135 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.98□□□□□ -1.93
CLDN20P56880 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CLDN20P56880 Y_RNA.38-201ENST00000362617 102 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 RNU1-70P-201ENST00000362618 164 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 RNY3P3-201ENST00000363816 102 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 Y_RNA.333-201ENST00000365274 102 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 RNU6-877P-201ENST00000383868 107 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 MIR301A-201ENST00000385261 86 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AL354719.1-201ENST00000406535 843 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 RNA5SP111-201ENST00000411386 101 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AC063979.1-201ENST00000415539 377 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 SNRPEP10-201ENST00000420249 274 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AL160275.3-201ENST00000423876 471 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 ZNF863P-201ENST00000426746 417 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN20P56880 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.98□□□□□ -1.93
CLDN20P56880 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 CALM1P1-201ENST00000442082 433 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AC104058.1-201ENST00000448028 297 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AL590664.1-201ENST00000448065 339 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 SNRPFP3-201ENST00000457792 225 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 TRBV1-201ENST00000476502 284 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AC012181.1-201ENST00000479895 423 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 RPL32P34-201ENST00000486380 400 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 RPS15AP34-201ENST00000487776 387 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 EIF4EP3-201ENST00000498782 656 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 FAM92A1P2-202ENST00000504766 877 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 SNORD60.2-201ENST00000516883 86 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 IGHV3-76-201ENST00000522465 295 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 HIF1AP1-201ENST00000553642 175 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.98□□□□□ -1.93
CLDN20P56880 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CLDN20P56880 AC015917.1-201ENST00000579654 510 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.98□□□□□ -1.93
CLDN20P56880 AC010338.1-201ENST00000621823 717 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AL512643.1-201ENST00000635735 524 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 Z99571.1-201ENST00000636677 394 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 AL354685.2-201ENST00000448218 1447 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CLDN20P56880 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.98□□□□□ -1.93
CLDN20P56880 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.98□□□□□ -1.93
CLDN20P56880 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CLDN20P56880 MTND4P14-201ENST00000435799 1354 ntBASIC2.98□□□□□ -1.93
CLDN20P56880 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CLDN20P56880 MTND5P19-201ENST00000424872 1794 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN20P56880 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN20P56880 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.97□□□□□ -1.93
CLDN20P56880 Y_RNA.295-201ENST00000364918 102 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 RNU6-116P-201ENST00000384042 109 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 RNU6-217P-201ENST00000384164 104 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 SNORD37.1-201ENST00000390968 65 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 RNU6-193P-201ENST00000410977 107 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN20P56880 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN20P56880 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN20P56880 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.97□□□□□ -1.93
CLDN20P56880 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.97□□□□□ -1.93
CLDN20P56880 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.97□□□□□ -1.93
CLDN20P56880 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 SUMO2P6-201ENST00000505273 288 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLDN20P56880 AC006445.2-201ENST00000510061 472 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.97□□□□□ -1.93
CLDN20P56880 RNA5SP217-201ENST00000515959 91 ntBASIC2.97□□□□□ -1.93
CLDN20P56880 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms