Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H2P55055 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.29□□□□□ -1.88
NR1H2P55055 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.29□□□□□ -1.88
NR1H2P55055 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H2P55055 AC007991.1-201ENST00000522680 631 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AL512310.1-201ENST00000548639 172 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.29□□□□□ -1.88
NR1H2P55055 AL157871.3-201ENST00000557231 293 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H2P55055 MIR4775-201ENST00000581168 75 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 HMGN2P15-201ENST00000585707 270 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AC008752.3-201ENST00000588113 712 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.29□□□□□ -1.88
NR1H2P55055 AC093788.1-201ENST00000609356 927 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AC068944.2-201ENST00000610373 403 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AP001486.3-201ENST00000615334 372 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AC073476.4-201ENST00000628409 72 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 AC110079.1-202ENST00000635213 138 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.29□□□□□ -1.88
NR1H2P55055 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.29□□□□□ -1.88
NR1H2P55055 ZNF519P1-201ENST00000449011 1626 ntBASIC3.29□□□□□ -1.88
NR1H2P55055 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H2P55055 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H2P55055 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H2P55055 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H2P55055 Y_RNA.33-201ENST00000362591 102 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 DYNLT3P1-201ENST00000378574 347 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 Y_RNA.402-201ENST00000383972 102 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NR1H2P55055 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NR1H2P55055 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H2P55055 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H2P55055 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 USP9YP27-201ENST00000418455 438 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H2P55055 ATG3P1-201ENST00000419507 911 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H2P55055 AL353729.1-201ENST00000425044 720 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H2P55055 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H2P55055 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.28□□□□□ -1.88
NR1H2P55055 AL356010.1-201ENST00000456364 102 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 SCARNA14-201ENST00000516903 136 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 AL157687.1-201ENST00000554853 619 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H2P55055 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.28□□□□□ -1.88
NR1H2P55055 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.28□□□□□ -1.88
NR1H2P55055 MTND4LP5-201ENST00000605152 292 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 AL354950.2-201ENST00000617939 290 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.28□□□□□ -1.88
NR1H2P55055 MIR3199-2-201ENST00000636243 86 ntBASIC3.28□□□□□ -1.88
NR1H2P55055 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NR1H2P55055 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.28□□□□□ -1.89
NR1H2P55055 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NR1H2P55055 RNY4P14-201ENST00000363656 96 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RNA5SP72-201ENST00000364442 117 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 SNORD115-7-201ENST00000365306 82 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 Y_RNA.453-201ENST00000384223 109 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RNVU1-14-201ENST00000384770 164 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 MIR183-201ENST00000384958 110 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NR1H2P55055 SNORA11.2-201ENST00000408318 127 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RNU6-193P-201ENST00000410977 107 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 USP9YP6-201ENST00000413550 854 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AC092809.3-201ENST00000415453 231 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AC096649.2-201ENST00000416186 393 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 MTCO1P20-201ENST00000425366 358 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AC098614.2-201ENST00000426040 255 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AL358075.3-201ENST00000426289 226 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AL139415.2-201ENST00000431968 163 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RPS15AP5-201ENST00000436276 388 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.27□□□□□ -1.89
NR1H2P55055 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H2P55055 AL162395.1-201ENST00000457882 422 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AC083798.1-201ENST00000472671 131 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RN7SL293P-201ENST00000481765 281 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RPS27P26-201ENST00000494583 239 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RPS27AP10-201ENST00000496103 208 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RBBP4P6-201ENST00000508098 202 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 RNU6-1281P-201ENST00000516223 105 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.27□□□□□ -1.89
NR1H2P55055 OR5BN1P-201ENST00000532955 829 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AC010653.1-201ENST00000571108 881 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AP001094.1-201ENST00000579805 193 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.27□□□□□ -1.89
NR1H2P55055 AC007014.2-201ENST00000615581 479 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 AC011155.2-201ENST00000623202 216 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 MIR3688-2-201ENST00000636963 87 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 U6.105-201ENST00000637379 88 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 MIR1321-201ENST00000637766 79 ntBASIC3.27□□□□□ -1.89
NR1H2P55055 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H2P55055 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H2P55055 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NR1H2P55055 RNU6-1029P-201ENST00000384109 107 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms