Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC091042.1-201ENST00000579213 173 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 AL138963.2-201ENST00000605137 226 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 AC019206.1-201ENST00000621938 425 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.8□□□□□ -1.64
EPHA4P54764 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 Z73965.1-201ENST00000623412 2297 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
EPHA4P54764 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.8□□□□□ -1.64
EPHA4P54764 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EPHA4P54764 PCAT14-202ENST00000627127 3935 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHA4P54764 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHA4P54764 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHA4P54764 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHA4P54764 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHA4P54764 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
EPHA4P54764 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHA4P54764 Y_RNA.304-201ENST00000365011 112 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 SNORD113-1-201ENST00000365321 69 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.79□□□□□ -1.64
EPHA4P54764 RNY1P5-201ENST00000383890 115 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 RNU6-1035P-201ENST00000384477 107 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 SNORA70.10-201ENST00000384515 134 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 RNU6-140P-201ENST00000384566 108 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 MIR613-201ENST00000385248 95 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHA4P54764 AL590139.1-201ENST00000416267 400 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHA4P54764 AC096638.1-201ENST00000444678 216 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 NUTF2P3-201ENST00000448540 384 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 AL451050.1-201ENST00000450126 415 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 AURKAPS2-201ENST00000454983 333 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 RNU6-1183P-201ENST00000517054 60 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.79□□□□□ -1.64
EPHA4P54764 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.79□□□□□ -1.64
EPHA4P54764 AC006349.1-201ENST00000555526 235 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 MIR4270-201ENST00000581799 70 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 AC004832.4-201ENST00000608952 331 ntBASIC4.79□□□□□ -1.64
EPHA4P54764 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHA4P54764 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHA4P54764 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
EPHA4P54764 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHA4P54764 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.79□□□□□ -1.64
EPHA4P54764 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EPHA4P54764 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.79□□□□□ -1.64
EPHA4P54764 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
EPHA4P54764 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHA4P54764 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EPHA4P54764 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.78□□□□□ -1.64
EPHA4P54764 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.78□□□□□ -1.64
EPHA4P54764 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHA4P54764 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EPHA4P54764 Y_RNA.286-201ENST00000364813 102 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 Y_RNA.319-201ENST00000365138 92 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 RNU6-658P-201ENST00000384606 106 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 RN7SKP100-201ENST00000411258 284 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHA4P54764 AL450023.3-201ENST00000440592 271 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 RPL37P4-201ENST00000448908 268 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 MTATP6P7-201ENST00000453315 681 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 Y_RNA.638-201ENST00000459374 113 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.78□□□□□ -1.64
EPHA4P54764 AC091021.1-201ENST00000468051 388 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 SNORD116-28-201ENST00000516123 91 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHA4P54764 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.78□□□□□ -1.64
EPHA4P54764 AC027288.2-201ENST00000553028 243 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHA4P54764 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.78□□□□□ -1.64
EPHA4P54764 H3F3AP1-201ENST00000559984 334 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 MIR5695-201ENST00000579717 85 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 AC021753.1-201ENST00000635724 168 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 U6.106-201ENST00000636360 105 ntBASIC4.78□□□□□ -1.64
EPHA4P54764 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EPHA4P54764 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.78□□□□□ -1.64
EPHA4P54764 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
EPHA4P54764 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EPHA4P54764 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
EPHA4P54764 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EPHA4P54764 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
EPHA4P54764 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
EPHA4P54764 AC015813.6-201ENST00000624409 5808 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.77□□□□□ -1.65
EPHA4P54764 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EPHA4P54764 RNU1-108P-201ENST00000362556 161 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 RNA5SP361-201ENST00000362686 118 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 RNU6-137P-201ENST00000363680 108 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 Y_RNA.230-201ENST00000364348 109 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 RNU6-47P-201ENST00000383866 107 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 RNU6-1081P-201ENST00000384537 107 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 MIR192-201ENST00000384915 110 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 MTHFD2P2-201ENST00000407725 247 ntBASIC4.77□□□□□ -1.65
EPHA4P54764 AC007738.1-201ENST00000413892 348 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms