Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMK1P53667 RNU2-68P-201ENST00000410878 191 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK1P53667 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK1P53667 BX295541.1-201ENST00000417774 250 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK1P53667 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK1P53667 AC087499.2-201ENST00000432861 149 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 RPL36AP53-201ENST00000432891 316 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 MTCO2P16-201ENST00000436962 677 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AL513043.1-201ENST00000439124 535 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMK1P53667 RPS15AP7-201ENST00000439294 405 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 RPS12P18-201ENST00000442381 270 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AL022238.1-201ENST00000442557 355 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AL136380.1-201ENST00000447970 162 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 RPL26P9-201ENST00000457466 433 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AC126182.1-201ENST00000478134 357 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMK1P53667 AC103975.1-201ENST00000482506 483 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK1P53667 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK1P53667 SNORA31.18-201ENST00000517043 134 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 COX6CP5-201ENST00000527162 228 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMK1P53667 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMK1P53667 AC087883.1-201ENST00000551882 391 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 NRBF2P1-201ENST00000587407 859 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.95□□□□□ -1.94
LIMK1P53667 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
LIMK1P53667 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
LIMK1P53667 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LIMK1P53667 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LIMK1P53667 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.94□□□□□ -1.94
LIMK1P53667 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 SNORA51.4-201ENST00000364993 124 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIMK1P53667 RNU6-946P-201ENST00000383878 107 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 SNORD116-1-201ENST00000384335 95 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 RNU6-297P-201ENST00000384636 107 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AL139397.2-201ENST00000404529 772 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LIMK1P53667 RNA5SP344-201ENST00000411081 104 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 RPS12P24-201ENST00000412619 387 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMK1P53667 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMK1P53667 RPS24P1-201ENST00000438550 371 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC244505.5-201ENST00000443639 207 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 USP9YP29-201ENST00000445112 563 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AL513328.1-201ENST00000446460 224 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC117440.1-201ENST00000474107 571 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 RPL39P36-201ENST00000490784 156 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC093534.1-201ENST00000504977 132 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 SCGB1D5P-201ENST00000515134 247 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 RNU4-29P-201ENST00000515943 174 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 SNORA31.3-201ENST00000516029 96 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 RNA5SP76-201ENST00000516277 87 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.94□□□□□ -1.94
LIMK1P53667 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.94□□□□□ -1.94
LIMK1P53667 AC022616.3-201ENST00000523940 148 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.94□□□□□ -1.94
LIMK1P53667 GLYCAM1-201ENST00000546596 285 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC025281.1-201ENST00000567026 265 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMK1P53667 OR1M4P-201ENST00000589199 287 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.94□□□□□ -1.94
LIMK1P53667 AC090578.1-201ENST00000604955 591 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AL158032.1-201ENST00000605401 106 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC087752.4-201ENST00000605911 462 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 RN7SKP299-201ENST00000606679 301 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 MIR98-201ENST00000606724 119 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AP002360.4-201ENST00000606980 481 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 AC135507.1-201ENST00000607214 561 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.94□□□□□ -1.94
LIMK1P53667 AL365204.3-201ENST00000612448 685 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
LIMK1P53667 AC084035.1-201ENST00000634543 607 ntBASIC2.94□□□□□ -1.94
LIMK1P53667 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
LIMK1P53667 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LIMK1P53667 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMK1P53667 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMK1P53667 U3.12-201ENST00000364498 214 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 SNORA68.1-201ENST00000364537 132 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 RNU6-39P-201ENST00000384344 107 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 RNU6-14P-201ENST00000384630 106 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 MIR196B-201ENST00000384852 84 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 RNU6-817P-201ENST00000391083 104 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 HMGN2P35-201ENST00000412164 270 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.93□□□□□ -1.94
LIMK1P53667 AC003685.2-201ENST00000422795 395 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMK1P53667 CST9LP2-201ENST00000437612 320 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 HMGB3P12-201ENST00000438745 556 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.93□□□□□ -1.94
LIMK1P53667 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMK1P53667 AC010424.1-201ENST00000506336 297 ntBASIC2.93□□□□□ -1.94
LIMK1P53667 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.93□□□□□ -1.94
LIMK1P53667 AC006362.1-201ENST00000567392 174 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms