Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
NUP98P52948 SNORA18.2-201ENST00000383865 132 ntBASIC1.35□□□□□ -2.19
NUP98P52948 RPL7P27-201ENST00000403775 720 ntBASIC1.35□□□□□ -2.19
NUP98P52948 AL592310.1-201ENST00000414330 671 ntBASIC1.35□□□□□ -2.19
NUP98P52948 MED14P1-201ENST00000430517 648 ntBASIC1.35□□□□□ -2.19
NUP98P52948 BOLA3P3-201ENST00000505182 232 ntBASIC1.35□□□□□ -2.19
NUP98P52948 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.35□□□□□ -2.19
NUP98P52948 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NUP98P52948 AC090502.2-201ENST00000549267 280 ntBASIC1.35□□□□□ -2.19
NUP98P52948 AC068276.1-201ENST00000605793 379 ntBASIC1.35□□□□□ -2.19
NUP98P52948 SNORD14A-201ENST00000606526 91 ntBASIC1.35□□□□□ -2.19
NUP98P52948 AL355802.4-201ENST00000607635 548 ntBASIC1.35□□□□□ -2.19
NUP98P52948 AL121652.1-201ENST00000608851 448 ntBASIC1.35□□□□□ -2.19
NUP98P52948 MIR6788-201ENST00000618842 66 ntBASIC1.35□□□□□ -2.19
NUP98P52948 AC008443.7-201ENST00000622195 246 ntBASIC1.35□□□□□ -2.19
NUP98P52948 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
NUP98P52948 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
NUP98P52948 Y_RNA.112-201ENST00000363250 102 ntBASIC1.34□□□□□ -2.19
NUP98P52948 TXNP7-201ENST00000406296 293 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AC096649.2-201ENST00000416186 393 ntBASIC1.34□□□□□ -2.19
NUP98P52948 ZNF90P2-204ENST00000419323 1075 ntBASIC1.34□□□□□ -2.19
NUP98P52948 SNRPEP10-201ENST00000420249 274 ntBASIC1.34□□□□□ -2.19
NUP98P52948 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.34□□□□□ -2.19
NUP98P52948 FAM204CP-201ENST00000424489 642 ntBASIC1.34□□□□□ -2.19
NUP98P52948 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.34□□□□□ -2.19
NUP98P52948 ZNF863P-201ENST00000426746 417 ntBASIC1.34□□□□□ -2.19
NUP98P52948 MTND4LP14-201ENST00000429447 288 ntBASIC1.34□□□□□ -2.19
NUP98P52948 MTND2P5-201ENST00000432656 1006 ntBASIC1.34□□□□□ -2.19
NUP98P52948 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.34□□□□□ -2.19
NUP98P52948 MTND5P8-201ENST00000449817 1083 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.34□□□□□ -2.19
NUP98P52948 RPL26P9-201ENST00000457466 433 ntBASIC1.34□□□□□ -2.19
NUP98P52948 KLF3P2-201ENST00000465138 268 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.34□□□□□ -2.19
NUP98P52948 AC113420.1-201ENST00000507903 571 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AC103833.1-201ENST00000517442 172 ntBASIC1.34□□□□□ -2.19
NUP98P52948 NACAP3-201ENST00000552100 481 ntBASIC1.34□□□□□ -2.19
NUP98P52948 MIR3126-201ENST00000577443 74 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AP003973.1-201ENST00000604639 691 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AL021997.1-201ENST00000605757 193 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AC069294.1-201ENST00000608397 350 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AL445493.3-201ENST00000619568 477 ntBASIC1.34□□□□□ -2.19
NUP98P52948 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
NUP98P52948 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
NUP98P52948 CCDC58P2-201ENST00000417131 366 ntBASIC1.33□□□□□ -2.2
NUP98P52948 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.33□□□□□ -2.2
NUP98P52948 BPY2DP-201ENST00000422208 265 ntBASIC1.33□□□□□ -2.2
NUP98P52948 AL512844.2-201ENST00000433990 593 ntBASIC1.33□□□□□ -2.2
NUP98P52948 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.33□□□□□ -2.2
NUP98P52948 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.33□□□□□ -2.2
NUP98P52948 MTND2P24-201ENST00000453434 806 ntBASIC1.33□□□□□ -2.2
NUP98P52948 HMGB3P17-201ENST00000504195 649 ntBASIC1.33□□□□□ -2.2
NUP98P52948 RNA5SP220-201ENST00000516298 104 ntBASIC1.33□□□□□ -2.2
NUP98P52948 RNU7-193P-201ENST00000516723 65 ntBASIC1.33□□□□□ -2.2
NUP98P52948 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.33□□□□□ -2.2
NUP98P52948 DUXAP5-201ENST00000529668 529 ntBASIC1.33□□□□□ -2.2
NUP98P52948 LINC00933-203ENST00000559812 219 ntBASIC1.33□□□□□ -2.2
NUP98P52948 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.33□□□□□ -2.2
NUP98P52948 AL671309.1-201ENST00000603750 544 ntBASIC1.33□□□□□ -2.2
NUP98P52948 MTND5P30-201ENST00000452896 1731 ntBASIC1.33□□□□□ -2.2
NUP98P52948 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NUP98P52948 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.33□□□□□ -2.2
NUP98P52948 AC246680.2-201ENST00000422106 389 ntBASIC1.33□□□□□ -2.2
NUP98P52948 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NUP98P52948 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.33□□□□□ -2.2
NUP98P52948 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.33□□□□□ -2.2
NUP98P52948 AC026801.1-201ENST00000497178 464 ntBASIC1.33□□□□□ -2.2
NUP98P52948 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.33□□□□□ -2.2
NUP98P52948 RNU6-113P-201ENST00000516653 101 ntBASIC1.33□□□□□ -2.2
NUP98P52948 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.33□□□□□ -2.2
NUP98P52948 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.33□□□□□ -2.2
NUP98P52948 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.33□□□□□ -2.2
NUP98P52948 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.33□□□□□ -2.2
NUP98P52948 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.33□□□□□ -2.2
NUP98P52948 AC080188.3-201ENST00000624842 748 ntBASIC1.33□□□□□ -2.2
NUP98P52948 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
NUP98P52948 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.32□□□□□ -2.2
NUP98P52948 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.32□□□□□ -2.2
NUP98P52948 RNU1-72P-201ENST00000362976 153 ntBASIC1.32□□□□□ -2.2
NUP98P52948 RNU6-1066P-201ENST00000363573 105 ntBASIC1.32□□□□□ -2.2
NUP98P52948 SNORA62.1-201ENST00000364287 154 ntBASIC1.32□□□□□ -2.2
NUP98P52948 SNORA16B-201ENST00000364674 135 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AP002784.2-201ENST00000397300 549 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AC008850.1-201ENST00000427546 362 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AC234064.1-201ENST00000436312 247 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AP000949.1-201ENST00000438328 629 ntBASIC1.32□□□□□ -2.2
NUP98P52948 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.32□□□□□ -2.2
NUP98P52948 GTF2IP12-201ENST00000456547 356 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.32□□□□□ -2.2
NUP98P52948 MIR892C-201ENST00000516410 77 ntBASIC1.32□□□□□ -2.2
NUP98P52948 RNU2-44P-201ENST00000516795 194 ntBASIC1.32□□□□□ -2.2
NUP98P52948 RNA5SP291-201ENST00000517222 105 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AC104229.1-201ENST00000561364 255 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AP001429.1-201ENST00000602568 530 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AC106052.1-201ENST00000608029 497 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AP002791.1-201ENST00000623291 381 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AC008555.8-201ENST00000623602 2168 ntBASIC1.32□□□□□ -2.2
NUP98P52948 AL359854.1-201ENST00000614203 1594 ntBASIC1.32□□□□□ -2.2
NUP98P52948 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NUP98P52948 SNORD116-23-201ENST00000384645 92 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms