Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.88□□□□□ -1.95
PDX1P52945 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDX1P52945 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDX1P52945 OR4G2P-201ENST00000328113 903 ntBASIC2.88□□□□□ -1.95
PDX1P52945 FTLP6-201ENST00000355274 422 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RNU6-179P-201ENST00000363350 107 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RNU6-217P-201ENST00000384164 104 ntBASIC2.88□□□□□ -1.95
PDX1P52945 SNORA46-201ENST00000384762 135 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RPS12P24-201ENST00000412619 387 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC245054.2-201ENST00000415639 319 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.88□□□□□ -1.95
PDX1P52945 AL109913.1-201ENST00000421173 514 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RPL36AP6-201ENST00000435770 321 ntBASIC2.88□□□□□ -1.95
PDX1P52945 SNRPEP4-201ENST00000435815 279 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC009969.1-201ENST00000438726 172 ntBASIC2.88□□□□□ -1.95
PDX1P52945 MTND4P25-201ENST00000441039 533 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.88□□□□□ -1.95
PDX1P52945 RPL37P4-201ENST00000448908 268 ntBASIC2.88□□□□□ -1.95
PDX1P52945 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDX1P52945 FABP5P15-201ENST00000453566 214 ntBASIC2.88□□□□□ -1.95
PDX1P52945 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RPL12P25-201ENST00000455592 494 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AL162395.1-201ENST00000457882 422 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC093899.1-201ENST00000457984 376 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RPS29P15-201ENST00000458329 171 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RPL9P33-201ENST00000484311 566 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC079382.1-201ENST00000493346 557 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RBBP4P6-201ENST00000508098 202 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.88□□□□□ -1.95
PDX1P52945 AC010493.1-201ENST00000513479 292 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RNU6-123P-201ENST00000516163 102 ntBASIC2.88□□□□□ -1.95
PDX1P52945 Y_RNA.689-201ENST00000516589 107 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RNA5SP291-201ENST00000517222 105 ntBASIC2.88□□□□□ -1.95
PDX1P52945 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.88□□□□□ -1.95
PDX1P52945 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.88□□□□□ -1.95
PDX1P52945 OR5AL2P-201ENST00000532185 920 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.88□□□□□ -1.95
PDX1P52945 CYCSP39-201ENST00000565821 309 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC068135.2-201ENST00000569293 1028 ntBASIC2.88□□□□□ -1.95
PDX1P52945 MIR4474-201ENST00000579189 78 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.88□□□□□ -1.95
PDX1P52945 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.88□□□□□ -1.95
PDX1P52945 DEFB131E-202ENST00000602581 683 ntBASIC2.88□□□□□ -1.95
PDX1P52945 ATP1B3P1-201ENST00000605365 821 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AL359880.1-201ENST00000621879 266 ntBASIC2.88□□□□□ -1.95
PDX1P52945 AC124864.2-201ENST00000624736 186 ntBASIC2.88□□□□□ -1.95
PDX1P52945 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.88□□□□□ -1.95
PDX1P52945 FAM35BP-202ENST00000497389 3337 ntBASIC2.88□□□□□ -1.95
PDX1P52945 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDX1P52945 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDX1P52945 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.88□□□□□ -1.95
PDX1P52945 AL355596.1-201ENST00000565399 3996 ntBASIC2.87□□□□□ -1.95
PDX1P52945 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
PDX1P52945 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PDX1P52945 GABRG2-229ENST00000641017 3628 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AC062016.1-201ENST00000355719 319 ntBASIC2.87□□□□□ -1.95
PDX1P52945 Y_RNA.245-201ENST00000364493 95 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PDX1P52945 SNORA18.3-201ENST00000384122 132 ntBASIC2.87□□□□□ -1.95
PDX1P52945 RNU6-140P-201ENST00000384566 108 ntBASIC2.87□□□□□ -1.95
PDX1P52945 Y_RNA.534-201ENST00000384599 112 ntBASIC2.87□□□□□ -1.95
PDX1P52945 MIR454-201ENST00000390180 115 ntBASIC2.87□□□□□ -1.95
PDX1P52945 MTCO3P40-201ENST00000392516 676 ntBASIC2.87□□□□□ -1.95
PDX1P52945 RPS4XP8-201ENST00000402039 771 ntBASIC2.87□□□□□ -1.95
PDX1P52945 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.87□□□□□ -1.95
PDX1P52945 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.87□□□□□ -1.95
PDX1P52945 AL139281.1-201ENST00000422120 335 ntBASIC2.87□□□□□ -1.95
PDX1P52945 ISCA1P1-201ENST00000426679 387 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AC022018.1-201ENST00000430685 241 ntBASIC2.87□□□□□ -1.95
PDX1P52945 DDX3P2-201ENST00000446138 111 ntBASIC2.87□□□□□ -1.95
PDX1P52945 CECR9-201ENST00000453421 199 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AC010099.1-201ENST00000455434 375 ntBASIC2.87□□□□□ -1.95
PDX1P52945 RNU6-420P-201ENST00000458780 107 ntBASIC2.87□□□□□ -1.95
PDX1P52945 RNU6-506P-201ENST00000516553 94 ntBASIC2.87□□□□□ -1.95
PDX1P52945 RNU6-1282P-201ENST00000516735 96 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.87□□□□□ -1.95
PDX1P52945 OR4R1P-201ENST00000529879 463 ntBASIC2.87□□□□□ -1.95
PDX1P52945 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDX1P52945 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.87□□□□□ -1.95
PDX1P52945 AL359212.1-201ENST00000556608 614 ntBASIC2.87□□□□□ -1.95
PDX1P52945 MIR3124-201ENST00000582636 67 ntBASIC2.87□□□□□ -1.95
PDX1P52945 ELOCP29-201ENST00000588193 334 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.87□□□□□ -1.95
PDX1P52945 Z99571.1-201ENST00000636677 394 ntBASIC2.87□□□□□ -1.95
PDX1P52945 API5P2-201ENST00000397055 1498 ntBASIC2.87□□□□□ -1.95
PDX1P52945 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.87□□□□□ -1.95
PDX1P52945 AC004944.1-201ENST00000517807 3059 ntBASIC2.87□□□□□ -1.95
PDX1P52945 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PDX1P52945 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PDX1P52945 Y_RNA.372-201ENST00000365599 102 ntBASIC2.86□□□□□ -1.95
PDX1P52945 RNU6-1035P-201ENST00000384477 107 ntBASIC2.86□□□□□ -1.95
PDX1P52945 Y_RNA.576-201ENST00000384781 102 ntBASIC2.86□□□□□ -1.95
PDX1P52945 RNU6-192P-201ENST00000391253 100 ntBASIC2.86□□□□□ -1.95
PDX1P52945 RPL21P3-201ENST00000395517 478 ntBASIC2.86□□□□□ -1.95
PDX1P52945 AF274854.1-201ENST00000413236 615 ntBASIC2.86□□□□□ -1.95
PDX1P52945 NDUFB4P5-201ENST00000415445 361 ntBASIC2.86□□□□□ -1.95
PDX1P52945 NUP35P1-201ENST00000422734 947 ntBASIC2.86□□□□□ -1.95
PDX1P52945 ZNF863P-201ENST00000426746 417 ntBASIC2.86□□□□□ -1.95
PDX1P52945 ELOCP14-201ENST00000428070 331 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms