Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RFX3P48380 VPS26BP1-201ENST00000417155 755 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX3P48380 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX3P48380 AL353729.1-201ENST00000425044 720 ntBASIC2.12□□□□□ -2.07
RFX3P48380 ISCA1P1-201ENST00000426679 387 ntBASIC2.12□□□□□ -2.07
RFX3P48380 RPL36AP53-201ENST00000432891 316 ntBASIC2.12□□□□□ -2.07
RFX3P48380 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.12□□□□□ -2.07
RFX3P48380 AL354941.1-201ENST00000438600 464 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL606517.1-201ENST00000446914 387 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL031659.1-201ENST00000447075 539 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX3P48380 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX3P48380 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.12□□□□□ -2.07
RFX3P48380 RNU6-703P-201ENST00000516946 107 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL512310.1-201ENST00000548639 172 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AP001004.1-201ENST00000582468 324 ntBASIC2.12□□□□□ -2.07
RFX3P48380 MIR4307-201ENST00000582802 84 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.12□□□□□ -2.07
RFX3P48380 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.12□□□□□ -2.07
RFX3P48380 AC013244.3-201ENST00000605614 388 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AC027449.1-201ENST00000608890 407 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AC107294.1-201ENST00000609524 467 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AC090970.3-201ENST00000612566 866 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL607023.1-201ENST00000620045 248 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL031667.3-201ENST00000620124 655 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AP002791.1-201ENST00000623291 381 ntBASIC2.12□□□□□ -2.07
RFX3P48380 AL160394.1-201ENST00000624765 724 ntBASIC2.12□□□□□ -2.07
RFX3P48380 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
RFX3P48380 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.12□□□□□ -2.07
RFX3P48380 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RFX3P48380 ADAM3A-203ENST00000461344 2157 ntBASIC2.11□□□□□ -2.07
RFX3P48380 RNU6-1200P-201ENST00000384162 107 ntBASIC2.11□□□□□ -2.07
RFX3P48380 RNU6-658P-201ENST00000384606 106 ntBASIC2.11□□□□□ -2.07
RFX3P48380 SNORA67.4-201ENST00000384688 142 ntBASIC2.11□□□□□ -2.07
RFX3P48380 RN7SKP192-201ENST00000411291 327 ntBASIC2.11□□□□□ -2.07
RFX3P48380 RPL23AP39-201ENST00000415533 405 ntBASIC2.11□□□□□ -2.07
RFX3P48380 OOSP1P1-201ENST00000423265 274 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AC007560.1-201ENST00000426912 237 ntBASIC2.11□□□□□ -2.07
RFX3P48380 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.11□□□□□ -2.07
RFX3P48380 HMGB1P27-201ENST00000431429 603 ntBASIC2.11□□□□□ -2.07
RFX3P48380 Z98742.2-201ENST00000431564 187 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.11□□□□□ -2.07
RFX3P48380 AL161651.1-201ENST00000440882 223 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.11□□□□□ -2.07
RFX3P48380 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.11□□□□□ -2.07
RFX3P48380 AC104435.1-201ENST00000483483 166 ntBASIC2.11□□□□□ -2.07
RFX3P48380 RPF2P2-201ENST00000504693 896 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 AC008413.1-201ENST00000511864 177 ntBASIC2.11□□□□□ -2.07
RFX3P48380 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.11□□□□□ -2.07
RFX3P48380 SNORA31.3-201ENST00000516029 96 ntBASIC2.11□□□□□ -2.07
RFX3P48380 RNU6-1003P-201ENST00000517099 105 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.11□□□□□ -2.07
RFX3P48380 IGLV3-17-201ENST00000519099 244 ntBASIC2.11□□□□□ -2.07
RFX3P48380 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RFX3P48380 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.11□□□□□ -2.07
RFX3P48380 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 RPS3AP4-201ENST00000555161 764 ntBASIC2.11□□□□□ -2.07
RFX3P48380 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.11□□□□□ -2.07
RFX3P48380 MIR3167-201ENST00000579623 85 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.11□□□□□ -2.07
RFX3P48380 RPS15AP11-201ENST00000594193 385 ntBASIC2.11□□□□□ -2.07
RFX3P48380 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.11□□□□□ -2.07
RFX3P48380 AC073544.2-201ENST00000601155 540 ntBASIC2.11□□□□□ -2.07
RFX3P48380 KC877982.1-201ENST00000602313 470 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AL355598.1-201ENST00000604169 202 ntBASIC2.11□□□□□ -2.07
RFX3P48380 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.11□□□□□ -2.07
RFX3P48380 AL355472.4-201ENST00000610233 626 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AC010678.1-201ENST00000614118 713 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.11□□□□□ -2.07
RFX3P48380 PISRT1-201ENST00000626175 531 ntBASIC2.11□□□□□ -2.07
RFX3P48380 MIR7157-201ENST00000635801 60 ntBASIC2.11□□□□□ -2.07
RFX3P48380 AP006437.1-201ENST00000641440 3685 ntBASIC2.11□□□□□ -2.07
RFX3P48380 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RFX3P48380 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
RFX3P48380 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.1□□□□□ -2.07
RFX3P48380 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX3P48380 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RFX3P48380 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RFX3P48380 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
RFX3P48380 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RFX3P48380 AL021407.1-201ENST00000404531 386 ntBASIC2.1□□□□□ -2.07
RFX3P48380 AL135786.1-201ENST00000415892 214 ntBASIC2.1□□□□□ -2.07
RFX3P48380 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.1□□□□□ -2.07
RFX3P48380 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.1□□□□□ -2.07
RFX3P48380 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX3P48380 MTND1P20-201ENST00000430341 950 ntBASIC2.1□□□□□ -2.07
RFX3P48380 TIMM9P1-201ENST00000436122 256 ntBASIC2.1□□□□□ -2.07
RFX3P48380 FABP5P14-201ENST00000437273 393 ntBASIC2.1□□□□□ -2.07
RFX3P48380 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.1□□□□□ -2.07
RFX3P48380 AL606662.1-201ENST00000445763 553 ntBASIC2.1□□□□□ -2.07
RFX3P48380 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.1□□□□□ -2.07
RFX3P48380 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms