Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD13P35453 RPL7P37-201ENST00000425095 738 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD13P35453 AC133104.1-201ENST00000429100 218 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD13P35453 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD13P35453 AC009296.1-201ENST00000443146 155 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 OSTCP8-201ENST00000445117 448 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD13P35453 AP000936.2-201ENST00000447151 681 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD13P35453 RPS26P21-201ENST00000475397 348 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 TRBV1-201ENST00000476502 284 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AC004924.1-201ENST00000480160 781 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AC010424.1-201ENST00000506336 297 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AC022447.1-201ENST00000515358 464 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 SNORA74D-201ENST00000516404 141 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 RNU6-1183P-201ENST00000517054 60 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD13P35453 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD13P35453 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD13P35453 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD13P35453 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD13P35453 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD13P35453 AC011471.1-201ENST00000585766 187 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD13P35453 AL451007.1-201ENST00000595491 289 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AC019159.1-201ENST00000605094 187 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AC005000.2-201ENST00000605468 310 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AC005046.1-201ENST00000608515 625 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AC024940.5-201ENST00000622889 474 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 U6.114-201ENST00000636407 96 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HOXD13P35453 AC026241.1-201ENST00000517873 2142 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AL390237.1-201ENST00000404226 1415 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD13P35453 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD13P35453 MTND5P17-201ENST00000418405 1603 ntBASIC3.08□□□□□ -1.92
HOXD13P35453 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD13P35453 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD13P35453 Y_RNA.22-201ENST00000362492 102 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 RNU1-112P-201ENST00000364401 164 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 RNU6-108P-201ENST00000365558 107 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 U8.9-201ENST00000365667 134 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD13P35453 AL356057.2-201ENST00000403318 432 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 SNORA11.1-201ENST00000408133 129 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXD13P35453 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXD13P35453 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD13P35453 AC007560.1-201ENST00000426912 237 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 AC022018.1-201ENST00000430685 241 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD13P35453 MTCO2P16-201ENST00000436962 677 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 MTATP6P26-201ENST00000445926 662 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD13P35453 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD13P35453 MTND4P2-201ENST00000507767 1203 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD13P35453 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXD13P35453 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXD13P35453 RNU6-572P-201ENST00000516724 80 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 RNU6-1220P-201ENST00000517126 108 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 SNORA31.26-201ENST00000517250 137 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.07□□□□□ -1.92
HOXD13P35453 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD13P35453 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXD13P35453 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXD13P35453 AC025755.1-201ENST00000521306 278 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXD13P35453 PIGPP4-201ENST00000584447 307 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 NBR2-204ENST00000587322 63 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXD13P35453 BNIP3P22-201ENST00000593399 556 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 AC119751.7-201ENST00000600494 245 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 AC006566.1-201ENST00000608943 513 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 AC025034.2-201ENST00000623264 286 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 CU459211.1-201ENST00000635667 749 ntBASIC3.07□□□□□ -1.92
HOXD13P35453 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD13P35453 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXD13P35453 AC004944.1-201ENST00000517807 3059 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXD13P35453 RNA5SP111-201ENST00000411386 101 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXD13P35453 MTCO2P34-201ENST00000421994 607 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXD13P35453 MTATP6P16-201ENST00000434543 526 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AL513043.1-201ENST00000439124 535 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXD13P35453 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXD13P35453 KLF3P2-201ENST00000465138 268 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC090525.1-201ENST00000479116 478 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 RN7SKP132-201ENST00000516001 208 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 RNU6-123P-201ENST00000516163 102 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 SNORA31.19-201ENST00000517079 126 ntBASIC3.06□□□□□ -1.92
HOXD13P35453 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXD13P35453 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXD13P35453 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms