Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.53□□□□□ -1.84
CIITAP33076 AP001486.3-201ENST00000615334 372 ntBASIC3.53□□□□□ -1.84
CIITAP33076 AC104260.1-201ENST00000616660 539 ntBASIC3.53□□□□□ -1.84
CIITAP33076 AC068831.7-201ENST00000616954 363 ntBASIC3.53□□□□□ -1.84
CIITAP33076 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.53□□□□□ -1.84
CIITAP33076 AC004972.1-201ENST00000623934 2209 ntBASIC3.53□□□□□ -1.84
CIITAP33076 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CIITAP33076 AC008568.2-201ENST00000623862 2313 ntBASIC3.53□□□□□ -1.84
CIITAP33076 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CIITAP33076 DDX10P1-201ENST00000448545 1933 ntBASIC3.52□□□□□ -1.85
CIITAP33076 MTND5P17-201ENST00000418405 1603 ntBASIC3.52□□□□□ -1.85
CIITAP33076 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.52□□□□□ -1.85
CIITAP33076 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CIITAP33076 SNORA62.1-201ENST00000364287 154 ntBASIC3.52□□□□□ -1.85
CIITAP33076 RNU6-61P-201ENST00000365528 109 ntBASIC3.52□□□□□ -1.85
CIITAP33076 SNORA24.1-201ENST00000384401 135 ntBASIC3.52□□□□□ -1.85
CIITAP33076 SNORD15B-201ENST00000384714 146 ntBASIC3.52□□□□□ -1.85
CIITAP33076 UBE2V1P2-201ENST00000397758 440 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC110754.1-201ENST00000399740 601 ntBASIC3.52□□□□□ -1.85
CIITAP33076 RAP1BP3-201ENST00000407180 549 ntBASIC3.52□□□□□ -1.85
CIITAP33076 RN7SKP220-201ENST00000410611 288 ntBASIC3.52□□□□□ -1.85
CIITAP33076 RPL21P111-201ENST00000418453 477 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.52□□□□□ -1.85
CIITAP33076 AL590383.1-201ENST00000428602 75 ntBASIC3.52□□□□□ -1.85
CIITAP33076 RPL26P6-201ENST00000440913 438 ntBASIC3.52□□□□□ -1.85
CIITAP33076 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.52□□□□□ -1.85
CIITAP33076 RPS29P15-201ENST00000458329 171 ntBASIC3.52□□□□□ -1.85
CIITAP33076 SNORD97-201ENST00000459187 142 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC105417.1-201ENST00000514691 285 ntBASIC3.52□□□□□ -1.85
CIITAP33076 RNU6-875P-201ENST00000516488 106 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC022690.1-201ENST00000526681 550 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.52□□□□□ -1.85
CIITAP33076 MIR4325-201ENST00000583049 90 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC010525.2-201ENST00000590920 195 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.52□□□□□ -1.85
CIITAP33076 AC106900.2-201ENST00000604994 317 ntBASIC3.52□□□□□ -1.85
CIITAP33076 DISC2.1-201ENST00000612827 205 ntBASIC3.52□□□□□ -1.85
CIITAP33076 MIR6076-201ENST00000617521 113 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC006111.3-201ENST00000622137 383 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC099506.2-201ENST00000623074 221 ntBASIC3.52□□□□□ -1.85
CIITAP33076 AC011155.2-201ENST00000623202 216 ntBASIC3.52□□□□□ -1.85
CIITAP33076 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.52□□□□□ -1.85
CIITAP33076 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CIITAP33076 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CIITAP33076 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
CIITAP33076 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CIITAP33076 AL354685.2-201ENST00000448218 1447 ntBASIC3.52□□□□□ -1.85
CIITAP33076 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CIITAP33076 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CIITAP33076 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CIITAP33076 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CIITAP33076 AC005183.1-201ENST00000603687 1979 ntBASIC3.51□□□□□ -1.85
CIITAP33076 AC073343.1-201ENST00000328239 651 ntBASIC3.51□□□□□ -1.85
CIITAP33076 Y_RNA.86-201ENST00000363020 111 ntBASIC3.51□□□□□ -1.85
CIITAP33076 RNU6-641P-201ENST00000384006 107 ntBASIC3.51□□□□□ -1.85
CIITAP33076 RNU6-76P-201ENST00000384060 104 ntBASIC3.51□□□□□ -1.85
CIITAP33076 RNU6-903P-201ENST00000391270 109 ntBASIC3.51□□□□□ -1.85
CIITAP33076 SNORA48.8-201ENST00000391324 134 ntBASIC3.51□□□□□ -1.85
CIITAP33076 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.51□□□□□ -1.85
CIITAP33076 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.51□□□□□ -1.85
CIITAP33076 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.51□□□□□ -1.85
CIITAP33076 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.51□□□□□ -1.85
CIITAP33076 RPL27AP5-201ENST00000469428 449 ntBASIC3.51□□□□□ -1.85
CIITAP33076 RN7SL442P-201ENST00000473804 320 ntBASIC3.51□□□□□ -1.85
CIITAP33076 EIF4EP3-201ENST00000498782 656 ntBASIC3.51□□□□□ -1.85
CIITAP33076 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.51□□□□□ -1.85
CIITAP33076 AC008885.1-201ENST00000514930 301 ntBASIC3.51□□□□□ -1.85
CIITAP33076 RNA5SP217-201ENST00000515959 91 ntBASIC3.51□□□□□ -1.85
CIITAP33076 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
CIITAP33076 SNORA64.4-201ENST00000516632 81 ntBASIC3.51□□□□□ -1.85
CIITAP33076 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.51□□□□□ -1.85
CIITAP33076 IGHV3-76-201ENST00000522465 295 ntBASIC3.51□□□□□ -1.85
CIITAP33076 CENPUP1-201ENST00000526649 1202 ntBASIC3.51□□□□□ -1.85
CIITAP33076 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.51□□□□□ -1.85
CIITAP33076 AC091135.1-201ENST00000585943 307 ntBASIC3.51□□□□□ -1.85
CIITAP33076 NRBF2P5-201ENST00000603087 788 ntBASIC3.51□□□□□ -1.85
CIITAP33076 AC009570.1-201ENST00000609599 745 ntBASIC3.51□□□□□ -1.85
CIITAP33076 AL591516.1-201ENST00000611326 274 ntBASIC3.51□□□□□ -1.85
CIITAP33076 AC104985.2-201ENST00000620598 500 ntBASIC3.51□□□□□ -1.85
CIITAP33076 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.51□□□□□ -1.85
CIITAP33076 AC009033.1-201ENST00000624279 431 ntBASIC3.51□□□□□ -1.85
CIITAP33076 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.5□□□□□ -1.85
CIITAP33076 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CIITAP33076 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CIITAP33076 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
CIITAP33076 RNU4-20P-201ENST00000365601 151 ntBASIC3.5□□□□□ -1.85
CIITAP33076 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CIITAP33076 RNU6-1029P-201ENST00000384109 107 ntBASIC3.5□□□□□ -1.85
CIITAP33076 RNU6-14P-201ENST00000384630 106 ntBASIC3.5□□□□□ -1.85
CIITAP33076 RNU6-1148P-201ENST00000410992 104 ntBASIC3.5□□□□□ -1.85
CIITAP33076 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.5□□□□□ -1.85
CIITAP33076 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.5□□□□□ -1.85
CIITAP33076 SRIP2-201ENST00000428470 166 ntBASIC3.5□□□□□ -1.85
CIITAP33076 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.5□□□□□ -1.85
CIITAP33076 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.5□□□□□ -1.85
CIITAP33076 AL162395.1-201ENST00000457882 422 ntBASIC3.5□□□□□ -1.85
CIITAP33076 RNU7-182P-201ENST00000459009 62 ntBASIC3.5□□□□□ -1.85
CIITAP33076 S100A11P2-201ENST00000467589 312 ntBASIC3.5□□□□□ -1.85
CIITAP33076 AC114786.4-201ENST00000508771 728 ntBASIC3.5□□□□□ -1.85
CIITAP33076 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms