Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 GPM6BP2-201ENST00000432046 144 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 MTND1P28-201ENST00000435623 950 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.59□□□□□ -1.99
PTPN4P29074 OSTCP8-201ENST00000445117 448 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 GPM6BP1-201ENST00000446387 144 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 COX6CP12-201ENST00000446748 202 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC022616.6-201ENST00000520479 119 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 AL359212.1-201ENST00000556608 614 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.59□□□□□ -1.99
PTPN4P29074 AC174048.1-201ENST00000603389 144 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 MTND4LP5-201ENST00000605152 292 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AC116312.1-201ENST00000606841 314 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AC013412.1-201ENST00000610687 192 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AC138749.5-201ENST00000611461 208 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PTPN4P29074 AC116165.2-201ENST00000616705 206 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.59□□□□□ -1.99
PTPN4P29074 MIR3974-201ENST00000637126 96 ntBASIC2.59□□□□□ -1.99
PTPN4P29074 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.59□□□□□ -2
PTPN4P29074 AC092104.1-201ENST00000497346 1441 ntBASIC2.59□□□□□ -2
PTPN4P29074 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
PTPN4P29074 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.58□□□□□ -2
PTPN4P29074 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.58□□□□□ -2
PTPN4P29074 U8.8-201ENST00000365399 135 ntBASIC2.58□□□□□ -2
PTPN4P29074 NDUFS5P1-201ENST00000405668 289 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC023141.4-201ENST00000412031 328 ntBASIC2.58□□□□□ -2
PTPN4P29074 AL356583.2-201ENST00000426536 280 ntBASIC2.58□□□□□ -2
PTPN4P29074 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.58□□□□□ -2
PTPN4P29074 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC098831.1-201ENST00000440661 216 ntBASIC2.58□□□□□ -2
PTPN4P29074 MTATP6P30-201ENST00000443540 664 ntBASIC2.58□□□□□ -2
PTPN4P29074 RPL32P28-201ENST00000443577 397 ntBASIC2.58□□□□□ -2
PTPN4P29074 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
PTPN4P29074 AC009961.3-201ENST00000449832 765 ntBASIC2.58□□□□□ -2
PTPN4P29074 CACYBPP2-201ENST00000453625 678 ntBASIC2.58□□□□□ -2
PTPN4P29074 RPL12P25-201ENST00000455592 494 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC133134.1-201ENST00000466800 359 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.58□□□□□ -2
PTPN4P29074 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.58□□□□□ -2
PTPN4P29074 FABP5P5-201ENST00000515537 406 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.58□□□□□ -2
PTPN4P29074 RNU4-29P-201ENST00000515943 174 ntBASIC2.58□□□□□ -2
PTPN4P29074 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.58□□□□□ -2
PTPN4P29074 RNU6-143P-201ENST00000516942 93 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC060788.1-201ENST00000521318 469 ntBASIC2.58□□□□□ -2
PTPN4P29074 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.58□□□□□ -2
PTPN4P29074 OR5BN1P-201ENST00000532955 829 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.58□□□□□ -2
PTPN4P29074 MIR5092-201ENST00000583139 88 ntBASIC2.58□□□□□ -2
PTPN4P29074 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.58□□□□□ -2
PTPN4P29074 MIR548AB-201ENST00000584917 84 ntBASIC2.58□□□□□ -2
PTPN4P29074 AP001981.2-201ENST00000603241 418 ntBASIC2.58□□□□□ -2
PTPN4P29074 AL161798.1-201ENST00000604630 131 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC004805.2-201ENST00000605382 482 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC013562.2-201ENST00000611632 603 ntBASIC2.58□□□□□ -2
PTPN4P29074 DUSP12P1-201ENST00000612874 516 ntBASIC2.58□□□□□ -2
PTPN4P29074 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.58□□□□□ -2
PTPN4P29074 AC092608.2-201ENST00000624427 218 ntBASIC2.58□□□□□ -2
PTPN4P29074 AL136313.1-201ENST00000624804 202 ntBASIC2.58□□□□□ -2
PTPN4P29074 AC010329.5-201ENST00000623497 2174 ntBASIC2.58□□□□□ -2
PTPN4P29074 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
PTPN4P29074 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PTPN4P29074 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PTPN4P29074 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PTPN4P29074 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PTPN4P29074 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
PTPN4P29074 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.57□□□□□ -2
PTPN4P29074 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN4P29074 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PTPN4P29074 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
PTPN4P29074 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PTPN4P29074 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 RNY3P13-201ENST00000365542 102 ntBASIC2.57□□□□□ -2
PTPN4P29074 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
PTPN4P29074 ISCA1P1-201ENST00000426679 387 ntBASIC2.57□□□□□ -2
PTPN4P29074 FCF1P1-201ENST00000432690 571 ntBASIC2.57□□□□□ -2
PTPN4P29074 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.57□□□□□ -2
PTPN4P29074 USP9YP12-201ENST00000450481 570 ntBASIC2.57□□□□□ -2
PTPN4P29074 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
PTPN4P29074 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.57□□□□□ -2
PTPN4P29074 MTCO2P29-201ENST00000465212 189 ntBASIC2.57□□□□□ -2
PTPN4P29074 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
PTPN4P29074 RBM43P1-201ENST00000476891 1081 ntBASIC2.57□□□□□ -2
PTPN4P29074 AC096725.1-201ENST00000514266 313 ntBASIC2.57□□□□□ -2
PTPN4P29074 SNORA31.11-201ENST00000516528 139 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms