Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC007038.2-201ENST00000608095 740 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AL355472.4-201ENST00000610233 626 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.78□□□□□ -2.12
HLA-DMAP28067 AC244517.12-201ENST00000623581 663 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
HLA-DMAP28067 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HLA-DMAP28067 RNU6-769P-201ENST00000384407 104 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MIR513B-201ENST00000385136 84 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MIR147B-201ENST00000390185 80 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MIR676-201ENST00000390702 67 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 RNU2-63P-201ENST00000410792 194 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 RNA5SP184-201ENST00000411071 108 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC078974.1-201ENST00000411597 223 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 EDDM3CP-201ENST00000415977 425 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MTCO2P21-201ENST00000419780 677 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 USP9YP26-201ENST00000421008 661 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 MTND1P20-201ENST00000430341 950 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 RPL35AP22-201ENST00000436855 335 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AL353689.1-201ENST00000438895 199 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC020550.1-201ENST00000447385 163 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 OR6C5P-201ENST00000452388 923 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC034222.1-201ENST00000494052 532 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC097462.2-201ENST00000504623 481 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC091965.2-201ENST00000512324 613 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 RNA5SP281-201ENST00000516504 135 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC013828.2-201ENST00000532487 235 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 CBX3P7-201ENST00000532876 502 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DMAP28067 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DMAP28067 DUXAP1-201ENST00000556632 463 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 MTND1P8-201ENST00000571424 950 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MIR3122-201ENST00000577243 73 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MIR3126-201ENST00000577443 74 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MIR3200-201ENST00000580767 85 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 MIR4293-201ENST00000584305 78 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC005000.2-201ENST00000605468 310 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AL607023.1-201ENST00000620045 248 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 AC097655.1-201ENST00000635075 318 ntBASIC1.77□□□□□ -2.13
HLA-DMAP28067 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
HLA-DMAP28067 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DMAP28067 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DMAP28067 ZNF876P-202ENST00000398732 1485 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 MTND4P16-201ENST00000466108 1367 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 RNU6-234P-201ENST00000365229 104 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 RSL24D1P4-201ENST00000400938 484 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 Z92545.1-201ENST00000411782 234 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 RPL26P27-201ENST00000414397 437 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 ZNF90P2-204ENST00000419323 1075 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 NUP35P1-201ENST00000422734 947 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 XKRYP1-201ENST00000423438 492 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 ELOCP14-201ENST00000428070 331 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC244035.1-201ENST00000430042 390 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 XKRYP2-201ENST00000432915 492 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 MTND1P32-201ENST00000433043 938 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC084290.1-201ENST00000434995 374 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 ELOCP7-201ENST00000439968 331 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 USP9YP8-201ENST00000441913 500 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 ELOCP30-201ENST00000447108 299 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 AL109933.2-201ENST00000452651 260 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 RPL23AP41-201ENST00000484754 458 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DMAP28067 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 RNA5SP137-201ENST00000516833 135 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 RNU6-64P-201ENST00000517119 105 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 RNA5SP290-201ENST00000517133 127 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC234778.2-201ENST00000566241 354 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC106782.4-201ENST00000568264 210 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 LARP7P3-201ENST00000579888 337 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC005261.5-201ENST00000596280 355 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 BNIP3P23-201ENST00000599655 511 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AC004908.2-201ENST00000609090 574 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DMAP28067 OR4G3P-201ENST00000633500 913 ntBASIC1.76□□□□□ -2.13
HLA-DMAP28067 U2.21-201ENST00000637295 81 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms