Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CD40P25942 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CD40P25942 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CD40P25942 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CD40P25942 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CD40P25942 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CD40P25942 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CD40P25942 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CD40P25942 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.72□□□□□ -1.81
CD40P25942 RNU1-14P-201ENST00000362759 152 ntBASIC3.72□□□□□ -1.81
CD40P25942 Y_RNA.252-201ENST00000364556 101 ntBASIC3.72□□□□□ -1.81
CD40P25942 RNU6-596P-201ENST00000365395 98 ntBASIC3.72□□□□□ -1.81
CD40P25942 U8.8-201ENST00000365399 135 ntBASIC3.72□□□□□ -1.81
CD40P25942 SNORA41-201ENST00000384675 132 ntBASIC3.72□□□□□ -1.81
CD40P25942 SNORA1.3-201ENST00000384676 136 ntBASIC3.72□□□□□ -1.81
CD40P25942 RNA5SP36-201ENST00000410197 133 ntBASIC3.72□□□□□ -1.81
CD40P25942 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.72□□□□□ -1.81
CD40P25942 AL353997.1-201ENST00000432936 108 ntBASIC3.72□□□□□ -1.81
CD40P25942 AC098831.1-201ENST00000440661 216 ntBASIC3.72□□□□□ -1.81
CD40P25942 HIGD1AP2-201ENST00000446367 280 ntBASIC3.72□□□□□ -1.81
CD40P25942 AC013470.1-201ENST00000453438 462 ntBASIC3.72□□□□□ -1.81
CD40P25942 RPL23AP81-201ENST00000455252 467 ntBASIC3.72□□□□□ -1.81
CD40P25942 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.72□□□□□ -1.81
CD40P25942 AC068781.1-201ENST00000488231 618 ntBASIC3.72□□□□□ -1.81
CD40P25942 RPS29P20-201ENST00000489592 171 ntBASIC3.72□□□□□ -1.81
CD40P25942 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.72□□□□□ -1.81
CD40P25942 RNA5SP519-201ENST00000516480 119 ntBASIC3.72□□□□□ -1.81
CD40P25942 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.72□□□□□ -1.81
CD40P25942 HSPE1P7-201ENST00000604681 321 ntBASIC3.72□□□□□ -1.81
CD40P25942 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.72□□□□□ -1.81
CD40P25942 AC006157.1-201ENST00000611750 366 ntBASIC3.72□□□□□ -1.81
CD40P25942 FAM27D1-201ENST00000612308 341 ntBASIC3.72□□□□□ -1.81
CD40P25942 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CD40P25942 AC090617.7-201ENST00000623952 126 ntBASIC3.72□□□□□ -1.81
CD40P25942 AC068724.3-201ENST00000625906 87 ntBASIC3.72□□□□□ -1.81
CD40P25942 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.72□□□□□ -1.81
CD40P25942 U4.7-201ENST00000638126 106 ntBASIC3.72□□□□□ -1.81
CD40P25942 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CD40P25942 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
CD40P25942 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.72□□□□□ -1.81
CD40P25942 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.72□□□□□ -1.81
CD40P25942 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CD40P25942 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CD40P25942 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 Y_RNA.145-201ENST00000363527 102 ntBASIC3.71□□□□□ -1.82
CD40P25942 RNU6-336P-201ENST00000364891 107 ntBASIC3.71□□□□□ -1.82
CD40P25942 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 Y_RNA.496-201ENST00000384444 101 ntBASIC3.71□□□□□ -1.82
CD40P25942 MIR518D-201ENST00000385014 87 ntBASIC3.71□□□□□ -1.82
CD40P25942 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.71□□□□□ -1.82
CD40P25942 HSPE1P12-201ENST00000412576 301 ntBASIC3.71□□□□□ -1.82
CD40P25942 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.71□□□□□ -1.82
CD40P25942 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.71□□□□□ -1.82
CD40P25942 AC011816.1-201ENST00000441346 546 ntBASIC3.71□□□□□ -1.82
CD40P25942 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 RPL26P9-201ENST00000457466 433 ntBASIC3.71□□□□□ -1.82
CD40P25942 FTH1P2-201ENST00000466086 412 ntBASIC3.71□□□□□ -1.82
CD40P25942 AL132838.2-201ENST00000492041 314 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.71□□□□□ -1.82
CD40P25942 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.71□□□□□ -1.82
CD40P25942 RN7SKP21-201ENST00000516503 220 ntBASIC3.71□□□□□ -1.82
CD40P25942 RNA5SP73-201ENST00000516744 108 ntBASIC3.71□□□□□ -1.82
CD40P25942 MIR2116-201ENST00000517221 80 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.71□□□□□ -1.82
CD40P25942 AP004607.1-201ENST00000524456 203 ntBASIC3.71□□□□□ -1.82
CD40P25942 CBX3P8-201ENST00000532412 525 ntBASIC3.71□□□□□ -1.82
CD40P25942 HIGD1AP1-201ENST00000550979 275 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC005476.1-201ENST00000554427 397 ntBASIC3.71□□□□□ -1.82
CD40P25942 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC007224.1-201ENST00000564410 144 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.71□□□□□ -1.82
CD40P25942 MIR3609-201ENST00000582661 80 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC020895.1-201ENST00000595362 272 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC008737.2-201ENST00000599446 118 ntBASIC3.71□□□□□ -1.82
CD40P25942 SRGNP1-201ENST00000603392 451 ntBASIC3.71□□□□□ -1.82
CD40P25942 AC002076.2-201ENST00000617362 122 ntBASIC3.71□□□□□ -1.82
CD40P25942 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CD40P25942 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
CD40P25942 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CD40P25942 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CD40P25942 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CD40P25942 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.71□□□□□ -1.82
CD40P25942 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CD40P25942 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CD40P25942 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CD40P25942 Y_RNA.428-201ENST00000384078 102 ntBASIC3.7□□□□□ -1.82
CD40P25942 RNY1P14-201ENST00000384426 108 ntBASIC3.7□□□□□ -1.82
CD40P25942 SNORD96B-201ENST00000386148 79 ntBASIC3.7□□□□□ -1.82
CD40P25942 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.7□□□□□ -1.82
CD40P25942 MIR1911-201ENST00000410783 80 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms