Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC234772.3-201ENST00000602277 528 ntBASIC2.61□□□□□ -1.99
HLA-DPA1P20036 MTCYBP22-201ENST00000603788 447 ntBASIC2.61□□□□□ -1.99
HLA-DPA1P20036 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DPA1P20036 MIR6852-201ENST00000621699 66 ntBASIC2.61□□□□□ -1.99
HLA-DPA1P20036 AC025048.6-202ENST00000627667 438 ntBASIC2.61□□□□□ -1.99
HLA-DPA1P20036 CU459211.1-201ENST00000635667 749 ntBASIC2.61□□□□□ -1.99
HLA-DPA1P20036 AC006927.3-201ENST00000638789 384 ntBASIC2.61□□□□□ -1.99
HLA-DPA1P20036 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DPA1P20036 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 SNORD62.1-201ENST00000362541 86 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 RNU6-960P-201ENST00000364056 120 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 RNA5SP125-201ENST00000364843 120 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 SNORA4.3-201ENST00000365564 137 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 RNU6-946P-201ENST00000383878 107 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 Y_RNA.534-201ENST00000384599 112 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 MIR34A-201ENST00000385130 110 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 RNA5SP210-201ENST00000391034 120 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 RNU2-52P-201ENST00000410680 190 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 USP9YP20-201ENST00000419224 558 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC007560.1-201ENST00000426912 237 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AL365184.2-201ENST00000431139 435 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AL591704.1-201ENST00000432574 275 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 MTND1P12-201ENST00000455231 147 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AL139109.1-201ENST00000455491 297 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 RPL22P13-201ENST00000493291 347 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC116655.1-201ENST00000508324 901 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 HMGB3P3-201ENST00000510526 400 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 SNORA31.19-201ENST00000517079 126 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AP005902.1-201ENST00000521358 186 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC243972.3-201ENST00000539655 198 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC002400.1-201ENST00000569310 726 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC174048.1-201ENST00000603389 144 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 AC092608.2-201ENST00000624427 218 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 CDC27P3-201ENST00000635418 1910 ntBASIC2.6□□□□□ -1.99
HLA-DPA1P20036 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DPA1P20036 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RNU5F-6P-201ENST00000362979 116 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RNU6-898P-201ENST00000365627 104 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RNU6-190P-201ENST00000384154 102 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RNU6-748P-201ENST00000384648 107 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 SNORD115.1-201ENST00000391109 76 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AL139039.1-201ENST00000401900 692 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RPS4XP7-201ENST00000406274 780 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 MIR892C-201ENST00000516410 77 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RN7SKP265-201ENST00000516448 223 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 ACA59.2-201ENST00000517061 156 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RNU6-1315P-201ENST00000517187 99 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 MIR4446-201ENST00000578505 67 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC105129.3-201ENST00000605455 485 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AC034229.4-201ENST00000607861 441 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 AL355816.2-201ENST00000610049 647 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.59□□□□□ -1.99
HLA-DPA1P20036 RNU6-500P-201ENST00000362349 107 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AL139095.1-201ENST00000404326 391 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 RNU6-1025P-201ENST00000410629 104 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DPA1P20036 AC080125.1-201ENST00000414888 684 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AC092809.3-201ENST00000415453 231 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPA1P20036 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPA1P20036 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DPA1P20036 RPS3AP44-201ENST00000425466 790 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AL008629.1-201ENST00000438615 184 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AL512286.1-201ENST00000439244 400 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AL590365.1-201ENST00000450788 243 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 BTF3P15-201ENST00000455606 336 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 UBE2DNL-203ENST00000474922 222 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 SRIP1-201ENST00000489235 288 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AC023194.1-201ENST00000493084 308 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPA1P20036 RNU6-826P-201ENST00000516827 104 ntBASIC2.58□□□□□ -2
HLA-DPA1P20036 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DPA1P20036 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DPA1P20036 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HLA-DPA1P20036 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DPA1P20036 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms