Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ZNF807-201ENST00000328088 1707 ntBASIC4.85□□□□□ -1.63
ERCC3P19447 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
ERCC3P19447 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC3P19447 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.85□□□□□ -1.63
ERCC3P19447 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ERCC3P19447 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ERCC3P19447 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC3P19447 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC3P19447 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC3P19447 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC3P19447 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC3P19447 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ERCC3P19447 SNORA62.3-201ENST00000365110 153 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 Y_RNA.445-201ENST00000384168 102 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 Y_RNA.594-201ENST00000410373 140 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 Z99755.1-201ENST00000414048 380 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC3P19447 USP9YP30-201ENST00000430729 455 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 AL645568.3-201ENST00000433683 316 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 RNA5SP246-201ENST00000458909 119 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 RPL30P14-201ENST00000482744 348 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 AF213884.1-201ENST00000488102 463 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 RN7SL604P-201ENST00000492589 296 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 MTCYBP40-201ENST00000509390 1135 ntBASIC4.84□□□□□ -1.63
ERCC3P19447 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC3P19447 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC3P19447 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC3P19447 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.84□□□□□ -1.63
ERCC3P19447 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.84□□□□□ -1.63
ERCC3P19447 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC3P19447 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC3P19447 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 Y_RNA.187-201ENST00000363918 113 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 RNU6-827P-201ENST00000365553 106 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ERCC3P19447 RNU6-1035P-201ENST00000384477 107 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 RNU6-310P-201ENST00000384655 107 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 MIR670-201ENST00000390142 98 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.83□□□□□ -1.64
ERCC3P19447 Y_RNA.646-201ENST00000410980 101 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.83□□□□□ -1.64
ERCC3P19447 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.83□□□□□ -1.64
ERCC3P19447 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.83□□□□□ -1.64
ERCC3P19447 BTF3P15-201ENST00000455606 336 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 AC108022.1-201ENST00000493466 478 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 Y_RNA.670-201ENST00000516255 105 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 Y_RNA.687-201ENST00000516558 91 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 RNU6-1183P-201ENST00000517054 60 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.83□□□□□ -1.64
ERCC3P19447 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.83□□□□□ -1.64
ERCC3P19447 AC011602.1-201ENST00000546484 331 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 MIR4444-1-201ENST00000581696 74 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 MIR4444-2-201ENST00000584390 74 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 AC018462.2-201ENST00000605375 395 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 AP000654.2-201ENST00000605633 586 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 AC092608.2-201ENST00000624427 218 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 MTND5P10-201ENST00000603719 1809 ntBASIC4.83□□□□□ -1.64
ERCC3P19447 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ERCC3P19447 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC3P19447 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ERCC3P19447 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.82□□□□□ -1.64
ERCC3P19447 MTND4P23-201ENST00000447723 1363 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC3P19447 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
ERCC3P19447 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
ERCC3P19447 SNORA1.3-201ENST00000384676 136 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 MIR1911-201ENST00000410783 80 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC3P19447 RPL31P12-201ENST00000422587 358 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 RPS15AP10-201ENST00000432472 382 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.82□□□□□ -1.64
ERCC3P19447 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC3P19447 MIR2053-201ENST00000459295 91 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 RPL23AP65-201ENST00000475608 468 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AK3P2-201ENST00000507976 429 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC3P19447 PPBPP1-201ENST00000510807 373 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 IFITM8P-201ENST00000522529 394 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AC006064.5-201ENST00000541782 248 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.82□□□□□ -1.64
ERCC3P19447 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.82□□□□□ -1.64
ERCC3P19447 AL080274.1-201ENST00000605565 220 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AL161629.2-201ENST00000615347 275 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AL138721.1-201ENST00000616756 179 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ERCC3P19447 Z69720.2-201ENST00000624755 279 ntBASIC4.82□□□□□ -1.64
ERCC3P19447 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC3P19447 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.82□□□□□ -1.64
ERCC3P19447 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC3P19447 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC3P19447 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ERCC3P19447 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms