Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC022893.3-201ENST00000607665 437 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AC008250.2-201ENST00000615261 205 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.84□□□□□ -1.95
PDGFRAP16234 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PDGFRAP16234 PISRT1-201ENST00000626175 531 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 Z99571.1-201ENST00000636677 394 ntBASIC2.84□□□□□ -1.95
PDGFRAP16234 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PDGFRAP16234 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PDGFRAP16234 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.84□□□□□ -1.96
PDGFRAP16234 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFRAP16234 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFRAP16234 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.83□□□□□ -1.96
PDGFRAP16234 RNY1P12-201ENST00000364251 105 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 RNU6-39P-201ENST00000384344 107 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 MIR558-201ENST00000384920 94 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 MIR301A-201ENST00000385261 86 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 RNU2-49P-201ENST00000410666 184 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AC096649.2-201ENST00000416186 393 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AL353729.1-201ENST00000425044 720 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFRAP16234 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFRAP16234 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFRAP16234 RPL36AP6-201ENST00000435770 321 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AC009961.2-201ENST00000435771 251 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AC104850.1-201ENST00000435940 476 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFRAP16234 BRK1P2-201ENST00000442875 223 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AC009296.1-201ENST00000443146 155 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFRAP16234 AC128713.1-201ENST00000471495 306 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.83□□□□□ -1.96
PDGFRAP16234 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.83□□□□□ -1.96
PDGFRAP16234 MRPS36P2-201ENST00000512569 299 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFRAP16234 GLYCAM1-201ENST00000546596 285 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 MTCO3P13-201ENST00000577757 781 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFRAP16234 MIR3167-201ENST00000579623 85 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
PDGFRAP16234 AC130324.3-201ENST00000614165 542 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 CR381653.2-201ENST00000624041 768 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 MIR3974-201ENST00000637126 96 ntBASIC2.83□□□□□ -1.96
PDGFRAP16234 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
PDGFRAP16234 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PDGFRAP16234 FARSBP1-201ENST00000435808 1778 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFRAP16234 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PDGFRAP16234 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFRAP16234 SNORA20.2-201ENST00000383922 131 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AC127391.1-201ENST00000411737 98 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AL109913.1-201ENST00000421173 514 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFRAP16234 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFRAP16234 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFRAP16234 MED13P1-201ENST00000428342 171 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.82□□□□□ -1.96
PDGFRAP16234 AL136380.1-201ENST00000447970 162 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 GAPDHP17-201ENST00000449858 1001 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 SNORA59A-201ENST00000459326 152 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFRAP16234 AC105252.1-201ENST00000503089 286 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AC010486.3-201ENST00000511602 785 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFRAP16234 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFRAP16234 Vault.3-201ENST00000516676 95 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 RNU6-914P-201ENST00000516749 109 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 OR5B19P-201ENST00000531766 928 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PDGFRAP16234 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFRAP16234 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFRAP16234 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.82□□□□□ -1.96
PDGFRAP16234 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.82□□□□□ -1.96
PDGFRAP16234 CLIC4P2-201ENST00000601934 717 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AL590229.1-201ENST00000603497 542 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AC011939.3-201ENST00000613686 466 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AL133173.2-201ENST00000614270 90 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 MIR6852-201ENST00000621699 66 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 AL512643.1-201ENST00000635735 524 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 MIR3199-2-201ENST00000636243 86 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PDGFRAP16234 MTND4P35-201ENST00000604257 1375 ntBASIC2.82□□□□□ -1.96
PDGFRAP16234 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PDGFRAP16234 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
PDGFRAP16234 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDGFRAP16234 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PDGFRAP16234 SNORA68.1-201ENST00000364537 132 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 RNY4P34-201ENST00000364779 95 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 RNU6-190P-201ENST00000384154 102 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 RNU6-658P-201ENST00000384606 106 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 RNU6-297P-201ENST00000384636 107 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 AL360182.1-201ENST00000397433 468 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PDGFRAP16234 RNU2-52P-201ENST00000410680 190 ntBASIC2.81□□□□□ -1.96
PDGFRAP16234 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.81□□□□□ -1.96
PDGFRAP16234 AC090960.1-201ENST00000421072 306 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms