Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.57□□□□□ -2.32
TOP2AP11388 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TOP2AP11388 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
TOP2AP11388 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.57□□□□□ -2.32
TOP2AP11388 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.57□□□□□ -2.32
TOP2AP11388 RNU4-7P-201ENST00000364758 141 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 RNU6-35P-201ENST00000384530 107 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 AL589655.1-201ENST00000405398 482 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 AC009518.2-201ENST00000418056 731 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.56□□□□□ -2.32
TOP2AP11388 AC097463.2-201ENST00000421074 142 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.56□□□□□ -2.32
TOP2AP11388 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.56□□□□□ -2.32
TOP2AP11388 BNIP3P25-201ENST00000596023 559 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.56□□□□□ -2.32
TOP2AP11388 AP000654.2-201ENST00000605633 586 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 AL365204.3-201ENST00000612448 685 ntBASIC0.56□□□□□ -2.32
TOP2AP11388 HMGB1P22-201ENST00000505315 124 ntBASIC0.55□□□□□ -2.32
TOP2AP11388 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.55□□□□□ -2.32
TOP2AP11388 MIR6086-201ENST00000638065 55 ntBASIC0.55□□□□□ -2.32
TOP2AP11388 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
TOP2AP11388 MRPL35P1-201ENST00000404272 572 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 MTCYBP34-201ENST00000439552 670 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.54□□□□□ -2.32
TOP2AP11388 SNRPGP6-201ENST00000451124 220 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.54□□□□□ -2.32
TOP2AP11388 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TOP2AP11388 AC019288.1-201ENST00000557918 224 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.54□□□□□ -2.32
TOP2AP11388 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TOP2AP11388 RNU6-338P-201ENST00000383888 105 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 RPS3AP24-201ENST00000407896 734 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 PIGFP2-201ENST00000421400 651 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.54□□□□□ -2.32
TOP2AP11388 HMGN1P10-201ENST00000474557 553 ntBASIC0.54□□□□□ -2.32
TOP2AP11388 Y_RNA.67-201ENST00000362870 100 ntBASIC0.53□□□□□ -2.33
TOP2AP11388 MTCO1P56-201ENST00000401674 224 ntBASIC0.53□□□□□ -2.33
TOP2AP11388 CST2P1-201ENST00000425770 87 ntBASIC0.53□□□□□ -2.33
TOP2AP11388 AP006587.4-201ENST00000526053 529 ntBASIC0.53□□□□□ -2.33
TOP2AP11388 AC021749.1-201ENST00000604322 607 ntBASIC0.53□□□□□ -2.33
TOP2AP11388 AL139344.1-201ENST00000605228 195 ntBASIC0.53□□□□□ -2.33
TOP2AP11388 AC006963.1-201ENST00000624003 1052 ntBASIC0.53□□□□□ -2.33
TOP2AP11388 RNU6-288P-201ENST00000363690 104 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
TOP2AP11388 AL031577.2-201ENST00000404133 280 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 AL117342.1-201ENST00000404861 406 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 AC006461.1-201ENST00000412637 326 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 AC244023.1-201ENST00000426884 112 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 RPL26P9-201ENST00000457466 433 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.52□□□□□ -2.33
TOP2AP11388 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.52□□□□□ -2.33
TOP2AP11388 AC022387.2-201ENST00000604050 448 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 AC242498.1-201ENST00000604134 111 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 AC243994.1-201ENST00000618627 109 ntBASIC0.52□□□□□ -2.33
TOP2AP11388 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.51□□□□□ -2.33
TOP2AP11388 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TOP2AP11388 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TOP2AP11388 RNU6-629P-201ENST00000384061 103 ntBASIC0.51□□□□□ -2.33
TOP2AP11388 MIR100-201ENST00000385259 80 ntBASIC0.51□□□□□ -2.33
TOP2AP11388 RPS15AP27-201ENST00000449183 343 ntBASIC0.51□□□□□ -2.33
TOP2AP11388 SNORD124-201ENST00000459577 104 ntBASIC0.51□□□□□ -2.33
TOP2AP11388 EIF4A1P12-201ENST00000551910 141 ntBASIC0.51□□□□□ -2.33
TOP2AP11388 AC106900.2-201ENST00000604994 317 ntBASIC0.51□□□□□ -2.33
TOP2AP11388 AC007792.1-201ENST00000623023 402 ntBASIC0.51□□□□□ -2.33
TOP2AP11388 MTCO1P23-201ENST00000415223 1526 ntBASIC0.5□□□□□ -2.33
TOP2AP11388 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TOP2AP11388 Y_RNA.274-201ENST00000364714 101 ntBASIC0.5□□□□□ -2.33
TOP2AP11388 SYPL1P1-201ENST00000473622 768 ntBASIC0.5□□□□□ -2.33
TOP2AP11388 RPL30P6-201ENST00000475925 342 ntBASIC0.5□□□□□ -2.33
TOP2AP11388 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TOP2AP11388 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TOP2AP11388 MIR4422-201ENST00000581938 83 ntBASIC0.5□□□□□ -2.33
TOP2AP11388 AL512506.2-201ENST00000624472 458 ntBASIC0.5□□□□□ -2.33
TOP2AP11388 MIR6759-201ENST00000638110 65 ntBASIC0.5□□□□□ -2.33
TOP2AP11388 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
TOP2AP11388 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.49□□□□□ -2.33
TOP2AP11388 AL590365.1-201ENST00000450788 243 ntBASIC0.49□□□□□ -2.33
TOP2AP11388 AC136628.3-201ENST00000521868 290 ntBASIC0.49□□□□□ -2.33
TOP2AP11388 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.49□□□□□ -2.33
TOP2AP11388 AP004371.1-201ENST00000525240 214 ntBASIC0.49□□□□□ -2.33
TOP2AP11388 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.49□□□□□ -2.33
TOP2AP11388 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.49□□□□□ -2.33
TOP2AP11388 AP001269.3-201ENST00000588718 329 ntBASIC0.49□□□□□ -2.33
TOP2AP11388 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.49□□□□□ -2.33
TOP2AP11388 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
TOP2AP11388 AC019070.1-201ENST00000415008 1024 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 AL365496.1-201ENST00000426885 215 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 SNORA48.9-201ENST00000516419 162 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 AC093510.2-201ENST00000562820 896 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 AC008751.2-201ENST00000597885 980 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.48□□□□□ -2.33
TOP2AP11388 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.48□□□□□ -2.33
TOP2AP11388 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 AC002550.2-201ENST00000621246 394 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 MTND4P16-201ENST00000466108 1367 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 MIR30A-201ENST00000385092 71 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TOP2AP11388 LINC01347-201ENST00000417964 355 ntBASIC0.48□□□□□ -2.33
TOP2AP11388 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.48□□□□□ -2.33
TOP2AP11388 GTF2IP12-201ENST00000456547 356 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms