Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CHRNB1P11230 API5P2-201ENST00000397055 1498 ntBASIC3.41□□□□□ -1.86
CHRNB1P11230 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.41□□□□□ -1.86
CHRNB1P11230 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.41□□□□□ -1.86
CHRNB1P11230 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
CHRNB1P11230 AL035425.3-201ENST00000564206 4996 ntBASIC3.4□□□□□ -1.86
CHRNB1P11230 AC009812.4-201ENST00000569134 1805 ntBASIC3.4□□□□□ -1.86
CHRNB1P11230 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CHRNB1P11230 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 RNU6-522P-201ENST00000364497 107 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 Y_RNA.529-201ENST00000384586 119 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 Y_RNA.576-201ENST00000384781 102 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 UBE2V1P2-201ENST00000397758 440 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 NDUFS5P1-201ENST00000405668 289 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 RN7SKP32-201ENST00000410167 303 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNB1P11230 RPL35AP12-201ENST00000425362 338 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 MTCO1P39-201ENST00000426148 480 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 MTATP6P4-201ENST00000427725 675 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AL158071.1-201ENST00000430315 461 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNB1P11230 TAAR7P-201ENST00000436141 242 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNB1P11230 RPL7P12-201ENST00000446719 750 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 RPL7P5-201ENST00000471472 736 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AC109925.1-201ENST00000478069 331 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 RPS4XP22-201ENST00000480755 780 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AC117522.3-201ENST00000507974 584 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 APOOP4-201ENST00000513530 597 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 RNU6-685P-201ENST00000517088 95 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 RNU6-1314P-201ENST00000517139 104 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNB1P11230 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNB1P11230 AP006587.4-201ENST00000526053 529 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CHRNB1P11230 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNB1P11230 AC087241.2-201ENST00000535801 324 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AC243972.3-201ENST00000539655 198 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNB1P11230 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNB1P11230 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 PSMA3P-201ENST00000555485 635 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNB1P11230 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.4□□□□□ -1.87
CHRNB1P11230 RPS3AP23-202ENST00000574601 686 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AL033523.1-201ENST00000605153 153 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AC073657.2-201ENST00000605661 303 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AC009248.2-201ENST00000619826 254 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 AC048347.1-201ENST00000624621 427 ntBASIC3.4□□□□□ -1.87
CHRNB1P11230 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNB1P11230 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CHRNB1P11230 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CHRNB1P11230 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.4□□□□□ -1.87
CHRNB1P11230 MTND4P35-201ENST00000604257 1375 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNB1P11230 RNU4-66P-201ENST00000365199 138 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 RNU6-510P-201ENST00000391239 108 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 HSPE1P26-201ENST00000405341 275 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AL356432.1-201ENST00000405809 419 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AL606923.1-201ENST00000406616 190 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 Y_RNA.615-201ENST00000410769 117 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 OR6C66P-201ENST00000414917 930 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AC009161.1-201ENST00000417306 376 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.39□□□□□ -1.87
CHRNB1P11230 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNB1P11230 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.39□□□□□ -1.87
CHRNB1P11230 RPL21P99-201ENST00000480369 423 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNB1P11230 HMGB1P22-201ENST00000505315 124 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AC108078.2-201ENST00000510750 236 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AC112206.3-201ENST00000514578 389 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 Y_RNA.665-201ENST00000516177 98 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AC107953.1-201ENST00000522216 297 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AC008489.1-201ENST00000524271 483 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNB1P11230 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNB1P11230 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNB1P11230 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.39□□□□□ -1.87
CHRNB1P11230 AC008521.1-201ENST00000587471 187 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AC174048.1-201ENST00000603389 144 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.39□□□□□ -1.87
CHRNB1P11230 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNB1P11230 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNB1P11230 AL365361.1-201ENST00000566942 3481 ntBASIC3.39□□□□□ -1.87
CHRNB1P11230 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
CHRNB1P11230 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHRNB1P11230 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNB1P11230 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
CHRNB1P11230 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHRNB1P11230 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNB1P11230 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHRNB1P11230 RNU4-73P-201ENST00000363164 141 ntBASIC3.38□□□□□ -1.87
CHRNB1P11230 RNU6-335P-201ENST00000364563 113 ntBASIC3.38□□□□□ -1.87
CHRNB1P11230 RNU6-283P-201ENST00000364788 107 ntBASIC3.38□□□□□ -1.87
CHRNB1P11230 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.38□□□□□ -1.87
CHRNB1P11230 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
CHRNB1P11230 RNU6-1074P-201ENST00000383995 104 ntBASIC3.38□□□□□ -1.87
CHRNB1P11230 RNU6-701P-201ENST00000384059 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms