Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
IGHV3-43DP0DP04 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2□□□□□ -2.09
IGHV3-43DP0DP04 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
IGHV3-43DP0DP04 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2□□□□□ -2.09
IGHV3-43DP0DP04 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 HSPE1P11-201ENST00000339579 310 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 MIR6073-201ENST00000352083 89 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 MIR21-201ENST00000362134 72 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 SNORD56.2-201ENST00000363242 71 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 RNU6-960P-201ENST00000364056 120 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 RNU1-109P-201ENST00000383960 147 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 RNU6-1083P-201ENST00000384022 107 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 RNU5A-2P-201ENST00000384337 116 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 SNORA41-201ENST00000384675 132 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 MIR518C-201ENST00000384822 101 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AL031577.2-201ENST00000404133 280 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 RNU4-72P-201ENST00000410754 173 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 RPL21P2-201ENST00000440049 481 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AL161651.1-201ENST00000440882 223 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 ART2BP-201ENST00000453501 499 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AL139824.2-201ENST00000458731 1095 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 GZMAP1-201ENST00000503054 631 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 NDUFB4P2-201ENST00000509515 391 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 RPPH1-2P-201ENST00000516688 293 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 SNORD19.2-201ENST00000516978 73 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 SNORA31.18-201ENST00000517043 134 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC106038.2-201ENST00000520706 568 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AP003122.3-201ENST00000526316 255 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC084851.1-201ENST00000529105 249 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC022878.1-201ENST00000530684 149 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AL121821.2-201ENST00000556081 394 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC106782.4-201ENST00000568264 210 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 ROCK1P1-201ENST00000573767 549 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC005261.5-201ENST00000596280 355 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AL391813.1-201ENST00000603098 260 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 MIR6817-201ENST00000615588 66 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 U4.3-201ENST00000621047 82 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
IGHV3-43DP0DP04 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL355596.1-201ENST00000565399 3996 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC080100.1-201ENST00000624239 5356 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 RNA5SP68-201ENST00000363885 119 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 MIR301A-201ENST00000385261 86 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 RNU6-1328P-201ENST00000410938 106 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC092809.3-201ENST00000415453 231 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL365203.2-201ENST00000423444 196 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC007283.2-201ENST00000424739 197 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL589872.1-201ENST00000426602 288 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC137499.1-201ENST00000427602 88 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL513328.1-201ENST00000446460 224 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 SNORA31.6-201ENST00000516241 130 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 RNU6-1183P-201ENST00000517054 60 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 BTF3P12-201ENST00000519620 469 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AP003122.4-201ENST00000530980 758 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC027176.1-201ENST00000560204 514 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC234778.2-201ENST00000566241 354 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 MIR548AB-201ENST00000584917 84 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 HMGN1P30-201ENST00000589286 268 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL645944.1-201ENST00000603857 493 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 Z99289.3-201ENST00000605586 594 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 RPL23AP88-201ENST00000605759 454 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AP002360.4-201ENST00000606980 481 ntBASIC1.98□□□□□ -2.09
IGHV3-43DP0DP04 AL137847.3-201ENST00000611521 109 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms