Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXC4P09017 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXC4P09017 BBIP1P1-201ENST00000602999 279 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC4P09017 AC011890.2-201ENST00000613393 294 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.39□□□□□ -2.03
HOXC4P09017 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC4P09017 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC4P09017 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXC4P09017 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HOXC4P09017 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HOXC4P09017 RNU6-744P-201ENST00000365557 107 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 RNU6-76P-201ENST00000384060 104 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 RNU6-1316P-201ENST00000384242 108 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 RPS3AP36-201ENST00000398190 775 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 MIR1305-201ENST00000408300 86 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXC4P09017 RNU4-53P-201ENST00000410828 140 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXC4P09017 USP9YP13-201ENST00000417797 480 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 MTCO2P5-201ENST00000422621 426 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXC4P09017 RPL7L1P10-201ENST00000427790 463 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXC4P09017 TAAR7P-201ENST00000436141 242 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 SDCBPP1-201ENST00000440192 890 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 PGBD4P3-201ENST00000440731 581 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 SDAD1P2-201ENST00000441308 2028 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC4P09017 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC4P09017 KLF3P2-201ENST00000465138 268 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC138853.1-201ENST00000503549 823 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC022447.3-201ENST00000506865 495 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 NDUFB4P2-201ENST00000509515 391 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC024589.1-201ENST00000512207 263 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC004944.1-201ENST00000517807 3059 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AP003122.4-201ENST00000530980 758 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 ZNF519P3-201ENST00000557158 1032 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC4P09017 AC025281.1-201ENST00000567026 265 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXC4P09017 AC090615.1-201ENST00000577519 154 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC009977.1-201ENST00000586015 570 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC112187.2-201ENST00000604345 283 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC112191.3-201ENST00000604371 277 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC007938.3-201ENST00000604965 623 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC013412.1-201ENST00000610687 192 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC004852.3-201ENST00000614131 326 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC008250.2-201ENST00000615261 205 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC064859.1-201ENST00000624741 174 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC068137.3-201ENST00000639191 341 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC099654.13-201ENST00000639774 207 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 AC073869.6-201ENST00000640656 341 ntBASIC2.38□□□□□ -2.03
HOXC4P09017 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
HOXC4P09017 CCT4P2-201ENST00000233836 1548 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 RNA5SP289-201ENST00000362332 137 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 RNU6-1180P-201ENST00000364935 107 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 RPS20P2-201ENST00000402520 389 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 MIR548F1-201ENST00000408667 84 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 Y_RNA.598-201ENST00000410480 95 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 MTCO1P17-201ENST00000411522 491 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.37□□□□□ -2.03
HOXC4P09017 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC4P09017 PAXBP1P1-201ENST00000449315 447 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC4P09017 AL033528.1-201ENST00000453780 140 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC093899.1-201ENST00000457984 376 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 FAM172BP-201ENST00000487497 1089 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC026436.1-201ENST00000510537 270 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC068587.4-201ENST00000533893 186 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC4P09017 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 TPMTP1-201ENST00000592307 737 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 AC008739.2-201ENST00000597006 317 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 BNIP3P8-201ENST00000597863 560 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 AC091965.4-201ENST00000607691 587 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 AL391813.2-201ENST00000609113 322 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 AL450472.3-201ENST00000615578 367 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 MIR4275-201ENST00000636486 87 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 OR5H6-203ENST00000642105 978 ntBASIC2.37□□□□□ -2.03
HOXC4P09017 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
HOXC4P09017 MTND5P26-201ENST00000426018 1752 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RNU1-105P-201ENST00000363470 161 ntBASIC2.36□□□□□ -2.03
HOXC4P09017 RN7SKP226-201ENST00000364912 300 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms