Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.75□□□□□ -1.97
VIMP08670 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.75□□□□□ -1.97
VIMP08670 AC090616.3-201ENST00000582184 217 ntBASIC2.75□□□□□ -1.97
VIMP08670 OR1M4P-201ENST00000589199 287 ntBASIC2.75□□□□□ -1.97
VIMP08670 AC005261.5-201ENST00000596280 355 ntBASIC2.75□□□□□ -1.97
VIMP08670 AL158032.1-201ENST00000605401 106 ntBASIC2.75□□□□□ -1.97
VIMP08670 MIR7515-201ENST00000637837 67 ntBASIC2.75□□□□□ -1.97
VIMP08670 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VIMP08670 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.75□□□□□ -1.97
VIMP08670 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VIMP08670 SNORA63.1-201ENST00000362493 131 ntBASIC2.74□□□□□ -1.97
VIMP08670 SNORA54-201ENST00000384281 123 ntBASIC2.74□□□□□ -1.97
VIMP08670 SNORA24.1-201ENST00000384401 135 ntBASIC2.74□□□□□ -1.97
VIMP08670 RNU6-248P-201ENST00000410720 107 ntBASIC2.74□□□□□ -1.97
VIMP08670 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.74□□□□□ -1.97
VIMP08670 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.74□□□□□ -1.97
VIMP08670 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.74□□□□□ -1.97
VIMP08670 RPS15AP7-201ENST00000439294 405 ntBASIC2.74□□□□□ -1.97
VIMP08670 MTND2P4-201ENST00000445034 1004 ntBASIC2.74□□□□□ -1.97
VIMP08670 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.74□□□□□ -1.97
VIMP08670 AL136380.1-201ENST00000447970 162 ntBASIC2.74□□□□□ -1.97
VIMP08670 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.74□□□□□ -1.97
VIMP08670 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.74□□□□□ -1.97
VIMP08670 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.74□□□□□ -1.97
VIMP08670 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.74□□□□□ -1.97
VIMP08670 SRIP1-201ENST00000489235 288 ntBASIC2.74□□□□□ -1.97
VIMP08670 RPS27P27-201ENST00000498779 255 ntBASIC2.74□□□□□ -1.97
VIMP08670 AC117522.1-201ENST00000509821 380 ntBASIC2.74□□□□□ -1.97
VIMP08670 AC108078.2-201ENST00000510750 236 ntBASIC2.74□□□□□ -1.97
VIMP08670 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.74□□□□□ -1.97
VIMP08670 AC091826.1-201ENST00000514065 313 ntBASIC2.74□□□□□ -1.97
VIMP08670 RNU6-572P-201ENST00000516724 80 ntBASIC2.74□□□□□ -1.97
VIMP08670 SNORA18.6-201ENST00000516792 115 ntBASIC2.74□□□□□ -1.97
VIMP08670 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.74□□□□□ -1.97
VIMP08670 AC087883.1-201ENST00000551882 391 ntBASIC2.74□□□□□ -1.97
VIMP08670 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.74□□□□□ -1.97
VIMP08670 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.74□□□□□ -1.97
VIMP08670 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.74□□□□□ -1.97
VIMP08670 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VIMP08670 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VIMP08670 TEX21P-201ENST00000447107 1476 ntBASIC2.73□□□□□ -1.97
VIMP08670 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.73□□□□□ -1.97
VIMP08670 RN7SKP226-201ENST00000364912 300 ntBASIC2.73□□□□□ -1.97
VIMP08670 SET-203ENST00000372688 801 ntTSL 2 BASIC2.73□□□□□ -1.97
VIMP08670 AL513475.1-201ENST00000406602 315 ntBASIC2.73□□□□□ -1.97
VIMP08670 RNU6-1025P-201ENST00000410629 104 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC080125.1-201ENST00000414888 684 ntBASIC2.73□□□□□ -1.97
VIMP08670 OR51A5P-201ENST00000415429 942 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.73□□□□□ -1.97
VIMP08670 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.73□□□□□ -1.97
VIMP08670 AL671855.1-201ENST00000446875 1203 ntBASIC2.73□□□□□ -1.97
VIMP08670 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.73□□□□□ -1.97
VIMP08670 AC233279.1-201ENST00000455300 423 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC026801.1-201ENST00000497178 464 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC083906.5-201ENST00000503722 328 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC117522.3-201ENST00000507974 584 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.73□□□□□ -1.97
VIMP08670 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.73□□□□□ -1.97
VIMP08670 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.73□□□□□ -1.97
VIMP08670 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.73□□□□□ -1.97
VIMP08670 SNORA31.11-201ENST00000516528 139 ntBASIC2.73□□□□□ -1.97
VIMP08670 MTND2P38-201ENST00000522536 667 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.73□□□□□ -1.97
VIMP08670 AL121821.2-201ENST00000556081 394 ntBASIC2.73□□□□□ -1.97
VIMP08670 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.73□□□□□ -1.97
VIMP08670 AL157871.3-201ENST00000557231 293 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.73□□□□□ -1.97
VIMP08670 AC007151.1-201ENST00000572774 483 ntBASIC2.73□□□□□ -1.97
VIMP08670 AC064872.1-201ENST00000604823 1072 ntBASIC2.73□□□□□ -1.97
VIMP08670 AL121992.2-201ENST00000606262 256 ntBASIC2.73□□□□□ -1.97
VIMP08670 AL158063.1-201ENST00000615349 536 ntBASIC2.73□□□□□ -1.97
VIMP08670 AL359547.2-201ENST00000615810 418 ntBASIC2.73□□□□□ -1.97
VIMP08670 MIR7975-201ENST00000619350 68 ntBASIC2.73□□□□□ -1.97
VIMP08670 MIR3651-201ENST00000630427 90 ntBASIC2.73□□□□□ -1.97
VIMP08670 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VIMP08670 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VIMP08670 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
VIMP08670 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
VIMP08670 ELL2P3-201ENST00000457883 1602 ntBASIC2.72□□□□□ -1.97
VIMP08670 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.72□□□□□ -1.97
VIMP08670 Y_RNA.201-201ENST00000364052 96 ntBASIC2.72□□□□□ -1.97
VIMP08670 Z98749.2-208ENST00000381646 500 ntBASIC2.72□□□□□ -1.97
VIMP08670 MIR183-201ENST00000384958 110 ntBASIC2.72□□□□□ -1.97
VIMP08670 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
VIMP08670 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.72□□□□□ -1.97
VIMP08670 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.72□□□□□ -1.97
VIMP08670 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.72□□□□□ -1.97
VIMP08670 AC007560.1-201ENST00000426912 237 ntBASIC2.72□□□□□ -1.97
VIMP08670 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.72□□□□□ -1.97
VIMP08670 RPL31P35-201ENST00000431058 377 ntBASIC2.72□□□□□ -1.97
VIMP08670 AC098826.1-201ENST00000433943 471 ntBASIC2.72□□□□□ -1.97
VIMP08670 RPS20P5-201ENST00000434808 360 ntBASIC2.72□□□□□ -1.97
VIMP08670 AL353706.1-201ENST00000436728 494 ntBASIC2.72□□□□□ -1.97
VIMP08670 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.72□□□□□ -1.97
VIMP08670 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.72□□□□□ -1.97
VIMP08670 OSTCP8-201ENST00000445117 448 ntBASIC2.72□□□□□ -1.97
VIMP08670 AP000936.2-201ENST00000447151 681 ntBASIC2.72□□□□□ -1.97
VIMP08670 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
VIMP08670 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.72□□□□□ -1.97
VIMP08670 AC004924.1-201ENST00000480160 781 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms