Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-201P-201ENST00000517100 61 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC022616.6-201ENST00000520479 119 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AP003122.3-201ENST00000526316 255 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC009094.1-201ENST00000564443 426 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC005261.5-201ENST00000596280 355 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC007938.3-201ENST00000604965 623 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC105129.3-201ENST00000605455 485 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC107294.1-201ENST00000609524 467 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC103710.2-201ENST00000609912 942 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AL589743.7-201ENST00000612637 233 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 DUSP12P1-201ENST00000612874 516 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 uc_338.12-201ENST00000616344 181 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC006338.1-201ENST00000618453 749 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC009831.4-201ENST00000620744 325 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC091953.2-201ENST00000623979 160 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC079416.3-201ENST00000624479 549 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AL359693.1-201ENST00000614959 2407 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC006020.1-201ENST00000420179 1854 ntBASIC1.97□□□□□ -2.09
HLA-DPB1P04440 AC010889.1-201ENST00000566193 2666 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 PABPC1P9-201ENST00000426076 1612 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 OR56A5-201ENST00000340110 738 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 RNY4P24-201ENST00000362735 96 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 RNU6-511P-201ENST00000363496 107 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 RNU6-288P-201ENST00000363690 104 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 RNU6-188P-201ENST00000364207 107 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 SMIM11P1-201ENST00000369586 178 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 Y_RNA.500-201ENST00000384466 111 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 SNORA67.4-201ENST00000384688 142 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 SNORA48.3-201ENST00000391081 134 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 FCF1P10-201ENST00000407590 479 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 NDUFS5P4-201ENST00000412983 318 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 RPL26P27-201ENST00000414397 437 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AC107081.1-201ENST00000414975 361 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AL592045.1-201ENST00000429867 352 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AL365184.2-201ENST00000431139 435 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AC098831.1-201ENST00000440661 216 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 EPS15P1-201ENST00000448836 336 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 SNORA59A-201ENST00000459326 152 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AF131216.2-201ENST00000512316 564 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 RNU6-1129P-201ENST00000515964 104 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 MTCYBP20-201ENST00000524239 1129 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 MTND4LP18-201ENST00000526864 291 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AC024619.4-201ENST00000580924 316 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 MIR3118-1-201ENST00000581787 76 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AC073544.2-201ENST00000601155 540 ntBASIC1.96□□□□□ -2.1
HLA-DPB1P04440 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DPB1P04440 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 HSPE1P11-201ENST00000339579 310 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 RNU6-533P-201ENST00000384144 107 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 RNU6-658P-201ENST00000384606 106 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 RPS4XP7-201ENST00000406274 780 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC005005.2-201ENST00000420779 380 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC010099.3-201ENST00000423896 409 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 RAC1P6-201ENST00000423911 575 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AL353729.1-201ENST00000425044 720 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AL445687.1-201ENST00000439946 251 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 EEF1B2P7-201ENST00000451177 676 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 ZNF114P1-201ENST00000453500 292 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 RPS15AP34-201ENST00000487776 387 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 COX6CP5-201ENST00000527162 228 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 RPS3AP4-201ENST00000555161 764 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC012435.1-202ENST00000568772 240 ntBASIC1.95□□□□□ -2.1
HLA-DPB1P04440 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms