Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 Y_RNA.29-201ENST00000362570 113 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RNU6-280P-201ENST00000364145 104 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 SNORA70.2-201ENST00000364506 135 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFAP04085 Z98749.2-208ENST00000381646 500 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RNU6-217P-201ENST00000384164 104 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RNU6-17P-201ENST00000384245 107 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RNU6-18P-201ENST00000384527 107 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 Y_RNA.555-201ENST00000384673 110 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AL079342.1-201ENST00000401460 267 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RNA5SP36-201ENST00000410197 133 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFAP04085 HMGN2P30-201ENST00000423237 256 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.6□□□□□ -1.67
PDGFAP04085 RPL19P16-201ENST00000433839 588 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 NDUFB4P6-201ENST00000436819 366 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AL356535.1-201ENST00000440335 398 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC010326.1-201ENST00000462726 602 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RPL7AP28-201ENST00000464513 571 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 IGKV1-32-201ENST00000519290 311 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.6□□□□□ -1.67
PDGFAP04085 MRPS36P4-201ENST00000534436 298 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFAP04085 MIR4284-201ENST00000578924 81 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC010928.2-201ENST00000588017 287 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC005255.1-201ENST00000593748 216 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC010201.1-201ENST00000605051 540 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 RPL23AP88-201ENST00000605759 454 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AC097372.5-201ENST00000623665 376 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 AL450472.1-202ENST00000637286 180 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFAP04085 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFAP04085 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PDGFAP04085 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PDGFAP04085 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
PDGFAP04085 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.6□□□□□ -1.67
PDGFAP04085 AC022336.2-201ENST00000568966 2538 ntBASIC4.6□□□□□ -1.67
PDGFAP04085 SCN1A-220ENST00000641603 12506 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFAP04085 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
PDGFAP04085 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFAP04085 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFAP04085 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PDGFAP04085 RNU6-600P-201ENST00000362524 99 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 RNU6-1301P-201ENST00000362724 104 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 Y_RNA.65-201ENST00000362846 100 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 SNORA73.1-201ENST00000363107 205 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 SNORD115-32-201ENST00000364079 82 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 RNY1-201ENST00000364228 113 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 RNU6-898P-201ENST00000365627 104 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 RNU6-1286P-201ENST00000383871 107 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 SNORD58.1-201ENST00000391313 66 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.59□□□□□ -1.67
PDGFAP04085 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFAP04085 RNA5SP44-201ENST00000410446 133 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.59□□□□□ -1.67
PDGFAP04085 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PDGFAP04085 CYCSP32-201ENST00000440548 321 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.59□□□□□ -1.67
PDGFAP04085 PRELID3BP1-201ENST00000457142 540 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 RPS26P21-201ENST00000475397 348 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 AC023141.12-201ENST00000512399 199 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 H3F3AP1-201ENST00000559984 334 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 HSPE1P5-201ENST00000561489 272 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 AC026470.2-201ENST00000561492 181 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 AC130289.1-201ENST00000577321 73 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 MIR4659A-201ENST00000580269 81 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.59□□□□□ -1.67
PDGFAP04085 AC024581.2-201ENST00000619986 252 ntBASIC4.59□□□□□ -1.67
PDGFAP04085 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.59□□□□□ -1.68
PDGFAP04085 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
PDGFAP04085 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFAP04085 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PDGFAP04085 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFAP04085 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFAP04085 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PDGFAP04085 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.58□□□□□ -1.68
PDGFAP04085 RNU6-50P-201ENST00000362356 103 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 RNU6-1266P-201ENST00000362794 105 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 Y_RNA.462-201ENST00000384268 102 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 MIR518D-201ENST00000385014 87 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 SNORA77-201ENST00000408716 125 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 AL732292.1-201ENST00000426692 226 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.58□□□□□ -1.68
PDGFAP04085 VDAC1P3-201ENST00000434069 851 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 BTF3P6-201ENST00000448054 499 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 RN7SL814P-201ENST00000487715 300 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.58□□□□□ -1.68
PDGFAP04085 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFAP04085 PARP1P2-201ENST00000556806 195 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 AC136624.4-201ENST00000573044 370 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 MIR8069-1-201ENST00000616627 86 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 AL023881.1-201ENST00000621088 301 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 MIR8069-2-201ENST00000621412 86 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 U2.21-201ENST00000637295 81 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PDGFAP04085 MUC2-202ENST00000613187 4845 ntBASIC4.58□□□□□ -1.68
PDGFAP04085 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms