Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AC104651.1-201ENST00000427559 735 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AL035407.1-201ENST00000429211 571 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 HMGN2P10-201ENST00000448085 265 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND4P03905 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AP006587.4-201ENST00000526053 529 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND4P03905 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AL049838.1-201ENST00000563647 981 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.84□□□□□ -2.11
MT-ND4P03905 MIR3199-1-201ENST00000582434 88 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AC009314.1-201ENST00000603871 304 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AC013244.3-201ENST00000605614 388 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
MT-ND4P03905 AL607023.1-201ENST00000620045 248 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AC098657.3-201ENST00000620434 263 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AL078595.3-201ENST00000623815 1166 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 AC007490.1-201ENST00000624321 703 ntBASIC1.84□□□□□ -2.11
MT-ND4P03905 KPNA2P1-201ENST00000458289 1591 ntBASIC1.84□□□□□ -2.12
MT-ND4P03905 ZNF876P-202ENST00000398732 1485 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 RNU6-701P-201ENST00000384059 107 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 RNU6-658P-201ENST00000384606 106 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 MIR218-1-201ENST00000384999 110 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 MIR513B-201ENST00000385136 84 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 SNORA48.3-201ENST00000391081 134 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 ZNF90P2-204ENST00000419323 1075 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.83□□□□□ -2.12
MT-ND4P03905 EIF4EP4-201ENST00000424916 578 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND4P03905 TIMM9P1-201ENST00000436122 256 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 UBE2FP3-201ENST00000436366 524 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 CR769776.1-201ENST00000441254 787 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AC118465.1-201ENST00000513820 1271 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 RNU6-703P-201ENST00000516946 107 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AC006199.1-201ENST00000548728 219 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AC009097.3-201ENST00000563557 1018 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 BNIP3P40-201ENST00000596017 556 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AC073544.2-201ENST00000601155 540 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AC007938.3-201ENST00000604965 623 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AL160281.1-201ENST00000605307 311 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AL391813.2-201ENST00000609113 322 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.83□□□□□ -2.12
MT-ND4P03905 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.83□□□□□ -2.12
MT-ND4P03905 AC093591.3-201ENST00000634516 308 ntBASIC1.83□□□□□ -2.12
MT-ND4P03905 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.83□□□□□ -2.12
MT-ND4P03905 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
MT-ND4P03905 ADAM3A-203ENST00000461344 2157 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 NACAP2-201ENST00000318548 624 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.82□□□□□ -2.12
MT-ND4P03905 RNA5SP289-201ENST00000362332 137 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.82□□□□□ -2.12
MT-ND4P03905 MTND1P20-201ENST00000430341 950 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.82□□□□□ -2.12
MT-ND4P03905 OR6C5P-201ENST00000452388 923 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 AC108059.3-201ENST00000456388 214 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 RPL37P6-201ENST00000460682 294 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 AL049873.1-201ENST00000480540 376 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.82□□□□□ -2.12
MT-ND4P03905 RNU5A-4P-201ENST00000516588 111 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AP003122.3-201ENST00000526316 255 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.82□□□□□ -2.12
MT-ND4P03905 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AC010186.2-204ENST00000537668 439 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 MRPS36P5-201ENST00000551909 298 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.82□□□□□ -2.12
MT-ND4P03905 ANP32BP3-201ENST00000559213 706 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AC106782.4-201ENST00000568264 210 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 MIR4307-201ENST00000582802 84 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.82□□□□□ -2.12
MT-ND4P03905 AC091152.3-201ENST00000604227 325 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 OR4G3P-201ENST00000633500 913 ntBASIC1.82□□□□□ -2.12
MT-ND4P03905 CENPCP1-201ENST00000533085 2578 ntBASIC1.81□□□□□ -2.12
MT-ND4P03905 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms