Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA1P02708 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA1P02708 AC003685.2-201ENST00000422795 395 ntBASIC2.53□□□□□ -2
CHRNA1P02708 MTND4P20-201ENST00000424125 869 ntBASIC2.53□□□□□ -2
CHRNA1P02708 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA1P02708 ELOCP14-201ENST00000428070 331 ntBASIC2.53□□□□□ -2
CHRNA1P02708 HMGB1P9-201ENST00000429856 646 ntBASIC2.53□□□□□ -2
CHRNA1P02708 ELOCP7-201ENST00000439968 331 ntBASIC2.53□□□□□ -2
CHRNA1P02708 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA1P02708 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA1P02708 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA1P02708 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.53□□□□□ -2
CHRNA1P02708 RPS3AP22-201ENST00000488297 769 ntBASIC2.53□□□□□ -2
CHRNA1P02708 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA1P02708 HMGB3P3-201ENST00000510526 400 ntBASIC2.53□□□□□ -2
CHRNA1P02708 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA1P02708 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.53□□□□□ -2
CHRNA1P02708 NACAP3-201ENST00000552100 481 ntBASIC2.53□□□□□ -2
CHRNA1P02708 SNRPGP18-201ENST00000553000 214 ntBASIC2.53□□□□□ -2
CHRNA1P02708 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA1P02708 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA1P02708 AC090616.2-202ENST00000584248 222 ntBASIC2.53□□□□□ -2
CHRNA1P02708 AP001981.2-201ENST00000603241 418 ntBASIC2.53□□□□□ -2
CHRNA1P02708 AC018638.7-201ENST00000605836 1114 ntBASIC2.53□□□□□ -2
CHRNA1P02708 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
CHRNA1P02708 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.53□□□□□ -2
CHRNA1P02708 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.53□□□□□ -2
CHRNA1P02708 Z82209.1-201ENST00000422141 2135 ntBASIC2.53□□□□□ -2.01
CHRNA1P02708 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA1P02708 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA1P02708 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA1P02708 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 SNORA38-201ENST00000363946 132 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 RNU6-501P-201ENST00000364072 100 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 RNU6-1072P-201ENST00000384703 107 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 RNU6-443P-201ENST00000384780 107 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 MTCYBP36-201ENST00000404146 440 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 RNU2-68P-201ENST00000410878 191 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.52□□□□□ -2.01
CHRNA1P02708 RPS27AP14-201ENST00000422868 454 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AC104651.1-201ENST00000427559 735 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA1P02708 AC010153.1-201ENST00000432862 727 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 RPS15AP28-201ENST00000435088 386 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 MTND1P28-201ENST00000435623 950 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA1P02708 AL133217.1-201ENST00000450980 425 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.52□□□□□ -2.01
CHRNA1P02708 ZNF114P1-201ENST00000453500 292 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 RPS27P27-201ENST00000498779 255 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA1P02708 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA1P02708 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA1P02708 MTND4LP18-201ENST00000526864 291 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 GLYCAM1-201ENST00000546596 285 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA1P02708 MRPS36P5-201ENST00000551909 298 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 PCMTD1P2-201ENST00000565017 355 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.52□□□□□ -2.01
CHRNA1P02708 MIR4769-201ENST00000584126 77 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 MIR4658-201ENST00000584344 65 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AL355472.4-201ENST00000610233 626 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AC013562.2-201ENST00000611632 603 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 AC011890.2-201ENST00000613393 294 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.52□□□□□ -2.01
CHRNA1P02708 AC093591.3-201ENST00000634516 308 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHRNA1P02708 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHRNA1P02708 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHRNA1P02708 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.52□□□□□ -2.01
CHRNA1P02708 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.52□□□□□ -2.01
CHRNA1P02708 AL445523.1-201ENST00000451184 1362 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.51□□□□□ -2.01
CHRNA1P02708 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA1P02708 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA1P02708 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHRNA1P02708 RNU6-500P-201ENST00000362349 107 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 SNORD114-1-201ENST00000362705 72 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 Y_RNA.97-201ENST00000363094 102 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CHRNA1P02708 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CHRNA1P02708 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CHRNA1P02708 AL591416.1-201ENST00000404015 867 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 RNU2-49P-201ENST00000410666 184 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 AC078974.1-201ENST00000411597 223 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 ELOCP17-201ENST00000414751 326 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.51□□□□□ -2.01
CHRNA1P02708 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.51□□□□□ -2.01
CHRNA1P02708 AL365184.2-201ENST00000431139 435 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.51□□□□□ -2.01
CHRNA1P02708 GPM6BP2-201ENST00000432046 144 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 RPL22P17-201ENST00000438729 315 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.51□□□□□ -2.01
CHRNA1P02708 GDI2P2-201ENST00000445131 608 ntBASIC2.51□□□□□ -2.01
CHRNA1P02708 GPM6BP1-201ENST00000446387 144 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms