Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RN7SKP219-201ENST00000516825 296 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.65□□□□□ -2.15
APOEP02649 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.65□□□□□ -2.15
APOEP02649 OR5AL2P-201ENST00000532185 920 ntBASIC1.65□□□□□ -2.15
APOEP02649 LINC00933-203ENST00000559812 219 ntBASIC1.65□□□□□ -2.15
APOEP02649 ROCK1P1-201ENST00000573767 549 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
APOEP02649 MIR3124-201ENST00000582636 67 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.65□□□□□ -2.15
APOEP02649 AL031274.2-201ENST00000599419 203 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC243960.4-201ENST00000600532 288 ntBASIC1.65□□□□□ -2.15
APOEP02649 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC243773.3-201ENST00000613270 256 ntBASIC1.65□□□□□ -2.15
APOEP02649 AL157770.1-201ENST00000623049 439 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC109454.4-201ENST00000623411 649 ntBASIC1.65□□□□□ -2.15
APOEP02649 AC019226.1-201ENST00000625666 515 ntBASIC1.65□□□□□ -2.15
APOEP02649 Y_RNA.245-201ENST00000364493 95 ntBASIC1.64□□□□□ -2.15
APOEP02649 RNU6-707P-201ENST00000364647 95 ntBASIC1.64□□□□□ -2.15
APOEP02649 TXNP7-201ENST00000406296 293 ntBASIC1.64□□□□□ -2.15
APOEP02649 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.64□□□□□ -2.15
APOEP02649 BX510359.4-201ENST00000423750 193 ntBASIC1.64□□□□□ -2.15
APOEP02649 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
APOEP02649 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.64□□□□□ -2.15
APOEP02649 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
APOEP02649 DNAJC19P4-201ENST00000440115 345 ntBASIC1.64□□□□□ -2.15
APOEP02649 AC104058.1-201ENST00000448028 297 ntBASIC1.64□□□□□ -2.15
APOEP02649 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.64□□□□□ -2.15
APOEP02649 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.64□□□□□ -2.15
APOEP02649 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.64□□□□□ -2.15
APOEP02649 RNA5SP165-201ENST00000517142 115 ntBASIC1.64□□□□□ -2.15
APOEP02649 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.64□□□□□ -2.15
APOEP02649 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
APOEP02649 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.64□□□□□ -2.15
APOEP02649 UBE2L4-201ENST00000587688 464 ntBASIC1.64□□□□□ -2.15
APOEP02649 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
APOEP02649 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.64□□□□□ -2.15
APOEP02649 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
APOEP02649 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.64□□□□□ -2.15
APOEP02649 AC107982.1-201ENST00000507171 1300 ntBASIC1.64□□□□□ -2.15
APOEP02649 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
APOEP02649 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
APOEP02649 RNU1-72P-201ENST00000362976 153 ntBASIC1.63□□□□□ -2.15
APOEP02649 RNA5SP213-201ENST00000391031 106 ntBASIC1.63□□□□□ -2.15
APOEP02649 POLHP1-201ENST00000411806 470 ntBASIC1.63□□□□□ -2.15
APOEP02649 TPMTP2-201ENST00000414372 726 ntBASIC1.63□□□□□ -2.15
APOEP02649 RPL26P27-201ENST00000414397 437 ntBASIC1.63□□□□□ -2.15
APOEP02649 RPS24P7-201ENST00000416921 246 ntBASIC1.63□□□□□ -2.15
APOEP02649 RSL24D1P8-201ENST00000434442 492 ntBASIC1.63□□□□□ -2.15
APOEP02649 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
APOEP02649 AL360221.1-201ENST00000445989 335 ntBASIC1.63□□□□□ -2.15
APOEP02649 RPL23AP6-201ENST00000446637 472 ntBASIC1.63□□□□□ -2.15
APOEP02649 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.63□□□□□ -2.15
APOEP02649 AC005410.1-202ENST00000460347 485 ntBASIC1.63□□□□□ -2.15
APOEP02649 HMGB1P35-201ENST00000503360 598 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC114981.1-201ENST00000503897 678 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC026414.1-201ENST00000504046 698 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.63□□□□□ -2.15
APOEP02649 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.63□□□□□ -2.15
APOEP02649 RNA5SP137-201ENST00000516833 135 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.63□□□□□ -2.15
APOEP02649 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
APOEP02649 AP003497.1-201ENST00000528472 562 ntBASIC1.63□□□□□ -2.15
APOEP02649 AL121821.2-201ENST00000556081 394 ntBASIC1.63□□□□□ -2.15
APOEP02649 AL731537.2-201ENST00000561565 951 ntBASIC1.63□□□□□ -2.15
APOEP02649 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.63□□□□□ -2.15
APOEP02649 AC079148.1-201ENST00000565944 819 ntBASIC1.63□□□□□ -2.15
APOEP02649 MTATP6P25-201ENST00000574491 261 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.63□□□□□ -2.15
APOEP02649 MTCYBP22-201ENST00000603788 447 ntBASIC1.63□□□□□ -2.15
APOEP02649 AL583856.2-201ENST00000606298 543 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC007038.2-201ENST00000608095 740 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC005332.6-201ENST00000613178 446 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC003001.2-201ENST00000616294 831 ntBASIC1.63□□□□□ -2.15
APOEP02649 AL109620.1-201ENST00000618738 1197 ntBASIC1.63□□□□□ -2.15
APOEP02649 AC079416.3-201ENST00000624479 549 ntBASIC1.63□□□□□ -2.15
APOEP02649 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.63□□□□□ -2.15
APOEP02649 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
APOEP02649 WWP1P1-201ENST00000466609 2769 ntBASIC1.63□□□□□ -2.15
APOEP02649 RNU5B-1-201ENST00000363286 116 ntBASIC1.62□□□□□ -2.15
APOEP02649 RNU6-19P-201ENST00000384718 107 ntBASIC1.62□□□□□ -2.15
APOEP02649 RNU2-42P-201ENST00000410697 113 ntBASIC1.62□□□□□ -2.15
APOEP02649 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.62□□□□□ -2.15
APOEP02649 AL513185.2-201ENST00000425543 193 ntBASIC1.62□□□□□ -2.15
APOEP02649 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.62□□□□□ -2.15
APOEP02649 USP9YP10-201ENST00000454868 628 ntBASIC1.62□□□□□ -2.15
APOEP02649 BX322784.1-201ENST00000455793 1077 ntBASIC1.62□□□□□ -2.15
APOEP02649 AC027575.1-201ENST00000481064 460 ntBASIC1.62□□□□□ -2.15
APOEP02649 AP005435.4-201ENST00000529514 284 ntBASIC1.62□□□□□ -2.15
APOEP02649 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.62□□□□□ -2.15
APOEP02649 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.62□□□□□ -2.15
APOEP02649 MTCYBP23-201ENST00000558717 1102 ntBASIC1.62□□□□□ -2.15
APOEP02649 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.62□□□□□ -2.15
APOEP02649 AC090079.2-201ENST00000575289 768 ntBASIC1.62□□□□□ -2.15
APOEP02649 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.62□□□□□ -2.15
APOEP02649 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.62□□□□□ -2.15
APOEP02649 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.62□□□□□ -2.15
APOEP02649 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.62□□□□□ -2.15
APOEP02649 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOEP02649 Z75746.1-201ENST00000440243 2080 ntBASIC1.62□□□□□ -2.15
APOEP02649 RNU6-114P-201ENST00000384704 105 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms