Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC097655.1-201ENST00000635075 318 ntBASIC1.42□□□□□ -2.18
COL4A1P02462 AC107982.1-201ENST00000507171 1300 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL4A1P02462 MIR222-201ENST00000384992 110 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 SNORD65.1-201ENST00000390889 71 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 TPMTP3-201ENST00000411928 735 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 TPMTP2-201ENST00000414372 726 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 MTCO3P12-201ENST00000416718 547 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AC007098.1-201ENST00000420122 367 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 MRPS36P1-201ENST00000421291 307 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.41□□□□□ -2.18
COL4A1P02462 THAP5P1-201ENST00000439089 262 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 KATNBL1P3-201ENST00000443475 909 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 OFD1P3Y-201ENST00000453312 783 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 Z82190.1-201ENST00000454534 490 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AC104164.3-201ENST00000467363 1258 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AC022493.1-201ENST00000492984 337 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 MTCYBP16-201ENST00000509187 1129 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 SNORA31.23-201ENST00000517219 133 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AC091163.3-201ENST00000518269 1144 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AP001189.2-201ENST00000527320 189 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.41□□□□□ -2.18
COL4A1P02462 AC125611.1-201ENST00000549563 229 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 SETP7-201ENST00000552169 453 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AL138976.2-201ENST00000563989 694 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AC090897.2-201ENST00000581715 130 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A1P02462 BNIP3P31-201ENST00000604515 566 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 AC112220.2-201ENST00000605513 533 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A1P02462 AC010975.3-201ENST00000618727 978 ntBASIC1.41□□□□□ -2.18
COL4A1P02462 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.41□□□□□ -2.18
COL4A1P02462 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
COL4A1P02462 Z82195.2-201ENST00000612348 18351 ntBASIC1.4□□□□□ -2.18
COL4A1P02462 DEFB108F-201ENST00000344638 222 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 RNU4-91P-201ENST00000364778 135 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 RNU6-234P-201ENST00000365229 104 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 RNU6-224P-201ENST00000384055 107 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 RNU6-952P-201ENST00000391164 108 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 RNU6-1197P-201ENST00000391183 107 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AL136310.1-201ENST00000404926 654 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 TIMM9P2-201ENST00000419324 266 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.4□□□□□ -2.19
COL4A1P02462 MTCO2P5-201ENST00000422621 426 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AC092047.1-201ENST00000424997 240 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
COL4A1P02462 AC234775.1-201ENST00000454247 670 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A1P02462 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A1P02462 AC112206.4-201ENST00000515142 405 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 ERHP1-201ENST00000523006 310 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A1P02462 DEFB108D-201ENST00000527787 222 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL4A1P02462 AL512347.1-201ENST00000566420 503 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AC011712.1-201ENST00000588959 234 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.4□□□□□ -2.19
COL4A1P02462 AL158050.2-201ENST00000605336 568 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AP002826.1-201ENST00000608835 315 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AC025588.4-201ENST00000615802 908 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AC011330.2-201ENST00000621680 635 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 AL356585.4-201ENST00000623078 1229 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 LINC02211-204ENST00000642024 1070 ntBASIC1.4□□□□□ -2.19
COL4A1P02462 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.4□□□□□ -2.19
COL4A1P02462 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
COL4A1P02462 Y_RNA.311-201ENST00000365068 96 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
COL4A1P02462 MIR548J-201ENST00000408833 112 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC092634.6-201ENST00000418558 192 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 C1DP1-201ENST00000426049 402 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 MTND2P20-201ENST00000440805 661 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A1P02462 RAC1P7-201ENST00000445367 377 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.39□□□□□ -2.19
COL4A1P02462 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.39□□□□□ -2.19
COL4A1P02462 RNU6-1282P-201ENST00000516735 96 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 RNA5SP471-201ENST00000516971 106 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 CASP1P1-201ENST00000526345 212 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A1P02462 DEFB131D-201ENST00000526803 184 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 HIGD1AP17-201ENST00000554576 276 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A1P02462 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.39□□□□□ -2.19
COL4A1P02462 AL391646.1-201ENST00000603860 190 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC021749.1-201ENST00000604322 607 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC024060.1-201ENST00000607052 494 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AL360181.4-201ENST00000621752 134 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AL049777.1-201ENST00000622740 518 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AL356473.1-201ENST00000406203 1408 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A1P02462 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A1P02462 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A1P02462 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL4A1P02462 Y_RNA.472-201ENST00000384322 102 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 MIR625-201ENST00000385047 85 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AL449283.1-202ENST00000418249 604 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC079780.1-201ENST00000428259 207 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.39□□□□□ -2.19
COL4A1P02462 GTF2IP3-201ENST00000433887 494 ntBASIC1.39□□□□□ -2.19
COL4A1P02462 AC024082.2-201ENST00000434771 238 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms