Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC006199.1-201ENST00000548728 219 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 MRPS36P5-201ENST00000551909 298 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 CYCSP39-201ENST00000565821 309 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC007151.1-201ENST00000572774 483 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC024619.4-201ENST00000580924 316 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 NRBF2P5-201ENST00000603087 788 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL670379.6-201ENST00000603753 252 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL670379.11-201ENST00000604059 253 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC008162.1-201ENST00000604718 254 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL670379.1-201ENST00000604752 252 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL670379.5-201ENST00000605253 252 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL670379.12-201ENST00000605291 253 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL160281.1-201ENST00000605307 311 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL670379.8-201ENST00000605353 252 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL670379.7-201ENST00000605823 252 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AL365204.3-201ENST00000612448 685 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC130324.3-201ENST00000614165 542 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 Z99571.1-201ENST00000636677 394 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 MTND5P42-201ENST00000637720 498 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 MTND4P35-201ENST00000604257 1375 ntBASIC1.81□□□□□ -2.12
HLA-DQA1P01909 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
HLA-DQA1P01909 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU4-1-201ENST00000363925 141 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU5E-5P-201ENST00000365379 116 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 Z98749.2-208ENST00000381646 500 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU6-946P-201ENST00000383878 107 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU6-1072P-201ENST00000384703 107 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU6-443P-201ENST00000384780 107 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC096649.2-201ENST00000416186 393 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 SEPT2P1-201ENST00000419651 180 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC007283.2-201ENST00000424739 197 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AL356583.2-201ENST00000426536 280 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 ARL5AP4-201ENST00000430731 512 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC011753.1-201ENST00000451001 220 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 MTATP6P7-201ENST00000453315 681 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC010587.1-201ENST00000505809 469 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU6-581P-201ENST00000516214 105 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU2-10P-201ENST00000516375 211 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNA5SP337-201ENST00000517007 109 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 RNU6-232P-201ENST00000517144 64 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC009902.1-201ENST00000519351 183 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 BTF3P12-201ENST00000519620 469 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 LARP7P3-201ENST00000579888 337 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 HMGN1P30-201ENST00000589286 268 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AL391813.1-201ENST00000603098 260 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AL022161.1-201ENST00000604390 213 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AL031775.1-201ENST00000607014 887 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC092140.2-201ENST00000618027 521 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC009878.1-201ENST00000621819 340 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 PISRT1-201ENST00000626175 531 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 U6.99-201ENST00000637524 83 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 ADAM3A-203ENST00000461344 2157 ntBASIC1.8□□□□□ -2.12
HLA-DQA1P01909 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DQA1P01909 AC080128.1-201ENST00000474389 1917 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 SNORD62.1-201ENST00000362541 86 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU6-859P-201ENST00000362728 107 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU5F-7P-201ENST00000363696 115 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU6-960P-201ENST00000364056 120 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 Y_RNA.534-201ENST00000384599 112 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU6-817P-201ENST00000391083 104 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 OR51A5P-201ENST00000415429 942 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AL589872.1-201ENST00000426602 288 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AL161651.1-201ENST00000440882 223 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC104389.3-201ENST00000445629 235 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 COX6CP12-201ENST00000446748 202 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC093899.1-201ENST00000457984 376 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AL139824.2-201ENST00000458731 1095 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 RNU6-953P-201ENST00000459154 107 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 BZW1P2-201ENST00000473537 826 ntBASIC1.79□□□□□ -2.12
HLA-DQA1P01909 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DQA1P01909 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms