Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.91□□□□□ -2.26
ABCA1O95477 RNU6-202P-201ENST00000515998 96 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 RNU6-405P-201ENST00000516637 110 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 RNU6-467P-201ENST00000517027 110 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.91□□□□□ -2.26
ABCA1O95477 AC124947.2-202ENST00000552735 133 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 AGGF1P5-201ENST00000567900 919 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 AC007349.4-201ENST00000608114 532 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 AC109809.1-201ENST00000619665 545 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 AC073308.1-201ENST00000623696 305 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 ZNF849P-201ENST00000594711 1566 ntBASIC0.91□□□□□ -2.26
ABCA1O95477 AC018630.2-201ENST00000534866 2403 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.9□□□□□ -2.26
ABCA1O95477 AC110491.1-201ENST00000562191 2010 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 Y_RNA.68-201ENST00000362881 102 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 RNU6-1339P-201ENST00000363574 91 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 SNORA40.19-201ENST00000390846 128 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 RNU11-5P-201ENST00000391216 129 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 PTGES3P2-201ENST00000407942 482 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 AC092573.2-201ENST00000434546 243 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 MTND2P21-201ENST00000436242 1042 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.9□□□□□ -2.26
ABCA1O95477 AL050341.1-201ENST00000447743 313 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.9□□□□□ -2.26
ABCA1O95477 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
ABCA1O95477 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.9□□□□□ -2.26
ABCA1O95477 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.9□□□□□ -2.26
ABCA1O95477 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.9□□□□□ -2.26
ABCA1O95477 AC022880.1-201ENST00000534017 973 ntBASIC0.9□□□□□ -2.26
ABCA1O95477 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.9□□□□□ -2.26
ABCA1O95477 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.9□□□□□ -2.26
ABCA1O95477 GDI2P1-201ENST00000429312 1336 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 SNORD14B-201ENST00000364533 90 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 Y_RNA.458-201ENST00000384240 102 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
ABCA1O95477 CISD1P1-201ENST00000393907 327 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 UBE2V1P11-201ENST00000411559 285 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 USP9YP19-201ENST00000412165 485 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 USP9YP13-201ENST00000417797 480 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
ABCA1O95477 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA1O95477 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA1O95477 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.9□□□□□ -2.27
ABCA1O95477 RNU6-1256P-201ENST00000516539 103 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 AC012435.1-202ENST00000568772 240 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 BPTFP1-201ENST00000579209 492 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 AC004908.2-201ENST00000609090 574 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 AC091304.6-201ENST00000619761 202 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 AC008133.2-201ENST00000624540 351 ntBASIC0.9□□□□□ -2.27
ABCA1O95477 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ABCA1O95477 RNU1-62P-201ENST00000362599 164 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 RN7SKP51-201ENST00000410781 304 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 EIF4EP4-201ENST00000424916 578 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AL353691.1-201ENST00000451332 387 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 RPL23AP3-201ENST00000453844 468 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 PABPC1P3-201ENST00000469174 459 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.89□□□□□ -2.27
ABCA1O95477 AC092451.2-201ENST00000538746 658 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 HSPE1P4-201ENST00000550617 308 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC087465.1-201ENST00000560574 245 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.89□□□□□ -2.27
ABCA1O95477 AL022067.1-201ENST00000602426 454 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC008121.1-201ENST00000603244 268 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 MTND4LP5-201ENST00000605152 292 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA1O95477 AC096586.1-201ENST00000610267 561 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC104763.3-201ENST00000613765 618 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA1O95477 AC007785.2-201ENST00000598627 1916 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 MIR126-201ENST00000362291 85 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 SNORA70.7-201ENST00000384159 133 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ABCA1O95477 TMSB4XP8-201ENST00000402089 135 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AL356432.1-201ENST00000405809 419 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 RNU2-63P-201ENST00000410792 194 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 TMSB4XP6-201ENST00000415187 135 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA1O95477 TMSB4XP1-201ENST00000424567 135 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA1O95477 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA1O95477 AL590233.1-201ENST00000430017 456 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AL591704.1-201ENST00000432574 275 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AL049734.2-201ENST00000441066 616 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.89□□□□□ -2.27
ABCA1O95477 TPRKBP1-201ENST00000456243 481 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 DUXAP8-207ENST00000456786 622 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC021382.1-201ENST00000483523 359 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.89□□□□□ -2.27
ABCA1O95477 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.89□□□□□ -2.27
ABCA1O95477 RNU6-928P-201ENST00000516876 104 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 HSPA8P13-201ENST00000523715 472 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.89□□□□□ -2.27
ABCA1O95477 AC084033.1-201ENST00000550830 633 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 NIFKP8-201ENST00000560500 874 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 SUB1P4-201ENST00000566062 339 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 VN1R107P-201ENST00000601784 209 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AC005034.5-201ENST00000604219 466 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 BX322635.1-201ENST00000605804 496 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 AL589743.7-201ENST00000612637 233 ntBASIC0.89□□□□□ -2.27
ABCA1O95477 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms