Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC128713.1-201ENST00000471495 306 ntBASIC3.25□□□□□ -1.89
RTN3O95197 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.25□□□□□ -1.89
RTN3O95197 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.25□□□□□ -1.89
RTN3O95197 AC139453.3-201ENST00000493276 369 ntBASIC3.25□□□□□ -1.89
RTN3O95197 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.25□□□□□ -1.89
RTN3O95197 AC009901.1-201ENST00000506703 541 ntBASIC3.25□□□□□ -1.89
RTN3O95197 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.25□□□□□ -1.89
RTN3O95197 RNA5SP217-201ENST00000515959 91 ntBASIC3.25□□□□□ -1.89
RTN3O95197 RNA5SP76-201ENST00000516277 87 ntBASIC3.25□□□□□ -1.89
RTN3O95197 RNU6-703P-201ENST00000516946 107 ntBASIC3.25□□□□□ -1.89
RTN3O95197 AC090136.1-201ENST00000520009 240 ntBASIC3.25□□□□□ -1.89
RTN3O95197 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.25□□□□□ -1.89
RTN3O95197 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.25□□□□□ -1.89
RTN3O95197 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RTN3O95197 ELF2P3-201ENST00000445099 1506 ntBASIC3.24□□□□□ -1.89
RTN3O95197 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTN3O95197 NACAP2-201ENST00000318548 624 ntBASIC3.24□□□□□ -1.89
RTN3O95197 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
RTN3O95197 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RTN3O95197 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.24□□□□□ -1.89
RTN3O95197 RNU6-74P-201ENST00000384235 107 ntBASIC3.24□□□□□ -1.89
RTN3O95197 RPL32P35-201ENST00000415214 394 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.24□□□□□ -1.89
RTN3O95197 GTF2IP20-201ENST00000431663 360 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.24□□□□□ -1.89
RTN3O95197 DPPA3P1-201ENST00000448050 469 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC132479.1-201ENST00000449160 144 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.24□□□□□ -1.89
RTN3O95197 TPT1P7-201ENST00000458300 517 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.24□□□□□ -1.89
RTN3O95197 MTND3P5-201ENST00000512798 333 ntBASIC3.24□□□□□ -1.89
RTN3O95197 RNU6-123P-201ENST00000516163 102 ntBASIC3.24□□□□□ -1.89
RTN3O95197 RN7SKP272-201ENST00000516988 232 ntBASIC3.24□□□□□ -1.89
RTN3O95197 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.24□□□□□ -1.89
RTN3O95197 MTCYBP20-201ENST00000524239 1129 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.24□□□□□ -1.89
RTN3O95197 AL157871.3-201ENST00000557231 293 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC025281.1-201ENST00000567026 265 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.24□□□□□ -1.89
RTN3O95197 MIR4513-201ENST00000581077 86 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC087683.1-201ENST00000591187 441 ntBASIC3.24□□□□□ -1.89
RTN3O95197 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.24□□□□□ -1.89
RTN3O95197 AC135507.2-201ENST00000612443 309 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AC093648.1-201ENST00000623546 606 ntBASIC3.24□□□□□ -1.89
RTN3O95197 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RTN3O95197 AC009161.2-201ENST00000624626 138 ntBASIC3.24□□□□□ -1.89
RTN3O95197 AL157786.1-207ENST00000627771 695 ntBASIC3.24□□□□□ -1.89
RTN3O95197 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RTN3O95197 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTN3O95197 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RTN3O95197 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTN3O95197 MIR22-201ENST00000362190 85 ntBASIC3.23□□□□□ -1.89
RTN3O95197 RNU4-24P-201ENST00000364565 139 ntBASIC3.23□□□□□ -1.89
RTN3O95197 SNORA4.3-201ENST00000365564 137 ntBASIC3.23□□□□□ -1.89
RTN3O95197 RNU6-658P-201ENST00000384606 106 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.23□□□□□ -1.89
RTN3O95197 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.23□□□□□ -1.89
RTN3O95197 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.23□□□□□ -1.89
RTN3O95197 MTCO2P11-201ENST00000431069 680 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.23□□□□□ -1.89
RTN3O95197 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.23□□□□□ -1.89
RTN3O95197 AC098831.1-201ENST00000440661 216 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.23□□□□□ -1.89
RTN3O95197 BRK1P2-201ENST00000442875 223 ntBASIC3.23□□□□□ -1.89
RTN3O95197 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AC023194.1-201ENST00000493084 308 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AC010493.1-201ENST00000513479 292 ntBASIC3.23□□□□□ -1.89
RTN3O95197 RNU1-143P-201ENST00000516296 146 ntBASIC3.23□□□□□ -1.89
RTN3O95197 SNORD27.1-201ENST00000516319 72 ntBASIC3.23□□□□□ -1.89
RTN3O95197 RNU6-405P-201ENST00000516637 110 ntBASIC3.23□□□□□ -1.89
RTN3O95197 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RTN3O95197 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.23□□□□□ -1.89
RTN3O95197 MIR1273C-201ENST00000578669 77 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AC005498.1-201ENST00000592125 465 ntBASIC3.23□□□□□ -1.89
RTN3O95197 Z84480.1-201ENST00000605131 311 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.23□□□□□ -1.89
RTN3O95197 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.23□□□□□ -1.89
RTN3O95197 U1.23-201ENST00000610293 146 ntBASIC3.23□□□□□ -1.89
RTN3O95197 RNU1-68P-201ENST00000615382 146 ntBASIC3.23□□□□□ -1.89
RTN3O95197 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.23□□□□□ -1.89
RTN3O95197 AC136475.10-201ENST00000620253 385 ntBASIC3.23□□□□□ -1.89
RTN3O95197 U1.39-201ENST00000621562 146 ntBASIC3.23□□□□□ -1.89
RTN3O95197 MIR6852-201ENST00000621699 66 ntBASIC3.23□□□□□ -1.89
RTN3O95197 MIR6733-201ENST00000635723 61 ntBASIC3.23□□□□□ -1.89
RTN3O95197 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.23□□□□□ -1.89
RTN3O95197 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RTN3O95197 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RTN3O95197 AC000403.1-201ENST00000613696 3585 ntBASIC3.22□□□□□ -1.89
RTN3O95197 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN3O95197 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTN3O95197 RNU5A-6P-201ENST00000384136 116 ntBASIC3.22□□□□□ -1.89
RTN3O95197 MIR1-2-201ENST00000384961 85 ntBASIC3.22□□□□□ -1.89
RTN3O95197 SNORD67-201ENST00000390833 111 ntBASIC3.22□□□□□ -1.89
RTN3O95197 Y_RNA.582-201ENST00000391023 95 ntBASIC3.22□□□□□ -1.89
RTN3O95197 UBA52P6-201ENST00000399822 382 ntBASIC3.22□□□□□ -1.89
RTN3O95197 MIR1289-1-201ENST00000408836 144 ntBASIC3.22□□□□□ -1.89
RTN3O95197 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN3O95197 RNU6-193P-201ENST00000410977 107 ntBASIC3.22□□□□□ -1.89
RTN3O95197 AC098614.2-201ENST00000426040 255 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms