Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AP004247.1-201ENST00000531556 1289 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.99□□□□□ -2.09
SEMA3DO95025 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.99□□□□□ -2.09
SEMA3DO95025 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.99□□□□□ -2.09
SEMA3DO95025 ANP32BP3-201ENST00000559213 706 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.99□□□□□ -2.09
SEMA3DO95025 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.99□□□□□ -2.09
SEMA3DO95025 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.99□□□□□ -2.09
SEMA3DO95025 MIR4293-201ENST00000584305 78 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 AC068790.3-201ENST00000602988 553 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 AC098826.3-201ENST00000603823 466 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 AL161798.1-201ENST00000604630 131 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 AL136370.1-201ENST00000608166 691 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 AL355472.4-201ENST00000610233 626 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 AL590808.1-201ENST00000618696 141 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.99□□□□□ -2.09
SEMA3DO95025 U2.21-201ENST00000637295 81 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SEMA3DO95025 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SEMA3DO95025 ZNF876P-202ENST00000398732 1485 ntBASIC1.99□□□□□ -2.09
SEMA3DO95025 RNU6-778P-201ENST00000363269 103 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 RNU6-512P-201ENST00000364438 103 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.98□□□□□ -2.09
SEMA3DO95025 MIR513B-201ENST00000385136 84 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 RNU6-750P-201ENST00000390946 107 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 RNA5SP270-201ENST00000411361 118 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.98□□□□□ -2.09
SEMA3DO95025 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.98□□□□□ -2.09
SEMA3DO95025 MED14P1-201ENST00000430517 648 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 LARP1BP3-201ENST00000437229 869 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.98□□□□□ -2.09
SEMA3DO95025 CR769776.1-201ENST00000441254 787 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.98□□□□□ -2.09
SEMA3DO95025 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.98□□□□□ -2.09
SEMA3DO95025 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.98□□□□□ -2.09
SEMA3DO95025 AC026801.1-201ENST00000497178 464 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SEMA3DO95025 RN7SKP258-201ENST00000517151 304 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.98□□□□□ -2.09
SEMA3DO95025 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.98□□□□□ -2.09
SEMA3DO95025 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.98□□□□□ -2.09
SEMA3DO95025 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.98□□□□□ -2.09
SEMA3DO95025 MIR5571-201ENST00000577998 113 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 AC007229.1-201ENST00000590455 412 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 AL096840.1-201ENST00000603287 93 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 AC091965.4-201ENST00000607691 587 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SEMA3DO95025 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
SEMA3DO95025 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.98□□□□□ -2.09
SEMA3DO95025 AC010378.1-201ENST00000619270 362 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 AC006927.4-201ENST00000639187 543 ntBASIC1.98□□□□□ -2.09
SEMA3DO95025 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SEMA3DO95025 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.98□□□□□ -2.09
SEMA3DO95025 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SEMA3DO95025 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.97□□□□□ -2.09
SEMA3DO95025 ELF2P3-201ENST00000445099 1506 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 MTND5P29-201ENST00000458676 1807 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 RNU6-931P-201ENST00000363850 107 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 RNA5SP425-201ENST00000410336 112 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.97□□□□□ -2.09
SEMA3DO95025 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.97□□□□□ -2.09
SEMA3DO95025 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.97□□□□□ -2.09
SEMA3DO95025 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.97□□□□□ -2.09
SEMA3DO95025 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.97□□□□□ -2.09
SEMA3DO95025 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SEMA3DO95025 MTND1P20-201ENST00000430341 950 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 AC124916.1-201ENST00000444020 547 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.97□□□□□ -2.09
SEMA3DO95025 AC072039.1-201ENST00000477611 581 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 RNU5F-8P-201ENST00000515941 111 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.97□□□□□ -2.09
SEMA3DO95025 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.97□□□□□ -2.09
SEMA3DO95025 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.97□□□□□ -2.09
SEMA3DO95025 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
SEMA3DO95025 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.97□□□□□ -2.09
SEMA3DO95025 AC009314.1-201ENST00000603871 304 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 AL627230.6-201ENST00000611129 280 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.97□□□□□ -2.09
SEMA3DO95025 OR4G3P-201ENST00000633500 913 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 AC010149.2-201ENST00000637608 315 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SEMA3DO95025 AL354685.2-201ENST00000448218 1447 ntBASIC1.97□□□□□ -2.09
SEMA3DO95025 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SEMA3DO95025 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.97□□□□□ -2.09
SEMA3DO95025 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.09
SEMA3DO95025 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
SEMA3DO95025 AC010889.1-201ENST00000566193 2666 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.96□□□□□ -2.1
SEMA3DO95025 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SEMA3DO95025 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.96□□□□□ -2.1
SEMA3DO95025 UBE2L2-201ENST00000254302 429 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 SNORA3.2-201ENST00000408221 125 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 RNU2-68P-201ENST00000410878 191 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AC078974.1-201ENST00000411597 223 ntBASIC1.96□□□□□ -2.1
SEMA3DO95025 AL008987.1-201ENST00000415528 237 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms