Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 DPPA3P3-201ENST00000603842 430 ntBASIC1.83□□□□□ -2.12
GMDSO60547 AC005034.5-201ENST00000604219 466 ntBASIC1.83□□□□□ -2.12
GMDSO60547 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.83□□□□□ -2.12
GMDSO60547 AC009233.1-201ENST00000616477 371 ntBASIC1.83□□□□□ -2.12
GMDSO60547 DUXAP9-208ENST00000622815 614 ntBASIC1.83□□□□□ -2.12
GMDSO60547 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.83□□□□□ -2.12
GMDSO60547 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
GMDSO60547 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
GMDSO60547 TEX21P-201ENST00000447107 1476 ntBASIC1.82□□□□□ -2.12
GMDSO60547 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GMDSO60547 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
GMDSO60547 RNU6-1284P-201ENST00000363701 100 ntBASIC1.82□□□□□ -2.12
GMDSO60547 RNU6-512P-201ENST00000364438 103 ntBASIC1.82□□□□□ -2.12
GMDSO60547 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
GMDSO60547 SNORA40.19-201ENST00000390846 128 ntBASIC1.82□□□□□ -2.12
GMDSO60547 RNU6-278P-201ENST00000390945 109 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AL359704.1-201ENST00000411586 781 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.82□□□□□ -2.12
GMDSO60547 RPS15AP9-201ENST00000439856 381 ntBASIC1.82□□□□□ -2.12
GMDSO60547 DNAJC19P4-201ENST00000440115 345 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AL161788.1-201ENST00000441805 169 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AP000542.1-201ENST00000448473 371 ntBASIC1.82□□□□□ -2.12
GMDSO60547 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.82□□□□□ -2.12
GMDSO60547 OR6C5P-201ENST00000452388 923 ntBASIC1.82□□□□□ -2.12
GMDSO60547 MTCO1P42-201ENST00000457379 726 ntBASIC1.82□□□□□ -2.12
GMDSO60547 SNORA59A-201ENST00000459326 152 ntBASIC1.82□□□□□ -2.12
GMDSO60547 HMGB3P17-201ENST00000504195 649 ntBASIC1.82□□□□□ -2.12
GMDSO60547 SMURF2P1-201ENST00000514992 481 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AC010376.1-201ENST00000522101 334 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.82□□□□□ -2.12
GMDSO60547 MIR4513-201ENST00000581077 86 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.82□□□□□ -2.12
GMDSO60547 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.82□□□□□ -2.12
GMDSO60547 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.82□□□□□ -2.12
GMDSO60547 AC073544.2-201ENST00000601155 540 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AL109918.3-201ENST00000603072 338 ntBASIC1.82□□□□□ -2.12
GMDSO60547 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.82□□□□□ -2.12
GMDSO60547 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.82□□□□□ -2.12
GMDSO60547 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
GMDSO60547 U6.99-201ENST00000637524 83 ntBASIC1.82□□□□□ -2.12
GMDSO60547 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
GMDSO60547 AC138393.1-203ENST00000327086 343 ntBASIC1.81□□□□□ -2.12
GMDSO60547 MIR19A-201ENST00000384878 82 ntBASIC1.81□□□□□ -2.12
GMDSO60547 MIR561-201ENST00000385216 97 ntBASIC1.81□□□□□ -2.12
GMDSO60547 GSTA9P-201ENST00000406231 611 ntBASIC1.81□□□□□ -2.12
GMDSO60547 RN7SKP266-201ENST00000410232 287 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 Z98742.3-201ENST00000418637 326 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.81□□□□□ -2.12
GMDSO60547 DPH3P2-201ENST00000422618 250 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AL160275.3-201ENST00000423876 471 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AL353706.1-201ENST00000436728 494 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC005094.1-201ENST00000440420 368 ntBASIC1.81□□□□□ -2.12
GMDSO60547 BRK1P2-201ENST00000442875 223 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AL136380.1-201ENST00000447970 162 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AL353705.4-201ENST00000449661 238 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AC092001.1-201ENST00000453012 261 ntBASIC1.81□□□□□ -2.12
GMDSO60547 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 PMCHL2-203ENST00000457791 237 ntBASIC1.81□□□□□ -2.12
GMDSO60547 RPF2P2-201ENST00000504693 896 ntBASIC1.81□□□□□ -2.12
GMDSO60547 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 SNORA31.3-201ENST00000516029 96 ntBASIC1.81□□□□□ -2.12
GMDSO60547 RNU6-1183P-201ENST00000517054 60 ntBASIC1.81□□□□□ -2.12
GMDSO60547 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.81□□□□□ -2.12
GMDSO60547 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 AC012213.3-201ENST00000577199 777 ntBASIC1.81□□□□□ -2.12
GMDSO60547 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
GMDSO60547 MIR4782-201ENST00000577987 79 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC009314.1-201ENST00000603871 304 ntBASIC1.81□□□□□ -2.12
GMDSO60547 RNU6-91P-201ENST00000607774 107 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
GMDSO60547 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC005296.1-201ENST00000616145 209 ntBASIC1.81□□□□□ -2.12
GMDSO60547 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC008121.3-201ENST00000618726 433 ntBASIC1.81□□□□□ -2.12
GMDSO60547 AC112204.3-201ENST00000623822 332 ntBASIC1.81□□□□□ -2.12
GMDSO60547 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
GMDSO60547 CDC27P3-201ENST00000635418 1910 ntBASIC1.8□□□□□ -2.12
GMDSO60547 AC103710.2-202ENST00000641454 2853 ntBASIC1.8□□□□□ -2.12
GMDSO60547 RNU6-462P-201ENST00000362659 105 ntBASIC1.8□□□□□ -2.12
GMDSO60547 RNU6-1280P-201ENST00000365211 107 ntBASIC1.8□□□□□ -2.12
GMDSO60547 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
GMDSO60547 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
GMDSO60547 RSL24D1P4-201ENST00000400938 484 ntBASIC1.8□□□□□ -2.12
GMDSO60547 AL139397.2-201ENST00000404529 772 ntBASIC1.8□□□□□ -2.12
GMDSO60547 RN7SKP192-201ENST00000411291 327 ntBASIC1.8□□□□□ -2.12
GMDSO60547 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.8□□□□□ -2.12
GMDSO60547 AL035407.1-201ENST00000429211 571 ntBASIC1.8□□□□□ -2.12
GMDSO60547 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.8□□□□□ -2.12
GMDSO60547 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.8□□□□□ -2.12
GMDSO60547 EEF1E1P1-201ENST00000446998 430 ntBASIC1.8□□□□□ -2.12
GMDSO60547 MTCO1P27-201ENST00000448269 226 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms