Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SAR1AP2-201ENST00000392696 594 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX3O60493 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX3O60493 RNU2-9P-201ENST00000410194 145 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX3O60493 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX3O60493 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX3O60493 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.73□□□□□ -1.97
SNX3O60493 RPL21P8-201ENST00000465083 535 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC091153.1-201ENST00000466297 402 ntBASIC2.73□□□□□ -1.97
SNX3O60493 RPS15AP34-201ENST00000487776 387 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC009901.1-201ENST00000506703 541 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC108078.1-201ENST00000508073 725 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX3O60493 RNU6-703P-201ENST00000516946 107 ntBASIC2.73□□□□□ -1.97
SNX3O60493 RNU6-1315P-201ENST00000517187 99 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC009902.1-201ENST00000519351 183 ntBASIC2.73□□□□□ -1.97
SNX3O60493 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX3O60493 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX3O60493 AC126118.1-201ENST00000607744 628 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC002064.3-201ENST00000623448 346 ntBASIC2.73□□□□□ -1.97
SNX3O60493 AC012442.3-202ENST00000636742 206 ntBASIC2.73□□□□□ -1.97
SNX3O60493 MTND5P26-201ENST00000426018 1752 ntBASIC2.73□□□□□ -1.97
SNX3O60493 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX3O60493 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX3O60493 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 MTND4P35-201ENST00000604257 1375 ntBASIC2.73□□□□□ -1.97
SNX3O60493 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX3O60493 RNU6-623P-201ENST00000363143 105 ntBASIC2.72□□□□□ -1.97
SNX3O60493 RN7SKP226-201ENST00000364912 300 ntBASIC2.72□□□□□ -1.97
SNX3O60493 SNORD115-7-201ENST00000365306 82 ntBASIC2.72□□□□□ -1.97
SNX3O60493 RNU6-1103P-201ENST00000384150 107 ntBASIC2.72□□□□□ -1.97
SNX3O60493 UBE2V1P2-201ENST00000397758 440 ntBASIC2.72□□□□□ -1.97
SNX3O60493 RNA5SP181-201ENST00000410246 98 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC023141.4-201ENST00000412031 328 ntBASIC2.72□□□□□ -1.97
SNX3O60493 NDUFS5P4-201ENST00000412983 318 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.72□□□□□ -1.97
SNX3O60493 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX3O60493 MTCO3P41-201ENST00000414801 328 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AL645937.1-202ENST00000421799 937 ntBASIC2.72□□□□□ -1.97
SNX3O60493 BPY2DP-201ENST00000422208 265 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AL158156.1-201ENST00000422509 473 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC009414.1-201ENST00000427200 443 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC005300.1-201ENST00000428401 373 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX3O60493 AC073464.1-201ENST00000429823 534 ntBASIC2.72□□□□□ -1.97
SNX3O60493 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX3O60493 GTF2IP20-201ENST00000431663 360 ntBASIC2.72□□□□□ -1.97
SNX3O60493 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.72□□□□□ -1.97
SNX3O60493 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX3O60493 WASF1P1-201ENST00000447560 1131 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.72□□□□□ -1.97
SNX3O60493 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNX3O60493 AC022364.2-201ENST00000457963 554 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC010493.1-201ENST00000513479 292 ntBASIC2.72□□□□□ -1.97
SNX3O60493 RN7SKP272-201ENST00000516988 232 ntBASIC2.72□□□□□ -1.97
SNX3O60493 RNU1-45P-201ENST00000517191 141 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX3O60493 FAM92A1P1-201ENST00000528023 890 ntBASIC2.72□□□□□ -1.97
SNX3O60493 OR4R1P-201ENST00000529879 463 ntBASIC2.72□□□□□ -1.97
SNX3O60493 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNX3O60493 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNX3O60493 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX3O60493 MIR4775-201ENST00000581168 75 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX3O60493 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.72□□□□□ -1.97
SNX3O60493 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.72□□□□□ -1.97
SNX3O60493 AL391646.1-201ENST00000603860 190 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC007938.3-201ENST00000604965 623 ntBASIC2.72□□□□□ -1.97
SNX3O60493 AC011155.2-201ENST00000623202 216 ntBASIC2.72□□□□□ -1.97
SNX3O60493 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.72□□□□□ -1.97
SNX3O60493 AC103988.1-201ENST00000566382 2177 ntBASIC2.71□□□□□ -1.97
SNX3O60493 CKAP2P1-201ENST00000555477 2049 ntBASIC2.71□□□□□ -1.98
SNX3O60493 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
SNX3O60493 NACAP2-201ENST00000318548 624 ntBASIC2.71□□□□□ -1.98
SNX3O60493 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNX3O60493 RNU6-658P-201ENST00000384606 106 ntBASIC2.71□□□□□ -1.98
SNX3O60493 RPL26P27-201ENST00000414397 437 ntBASIC2.71□□□□□ -1.98
SNX3O60493 RPS29P4-201ENST00000414733 161 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AL031779.1-201ENST00000415663 330 ntBASIC2.71□□□□□ -1.98
SNX3O60493 MTATP6P18-201ENST00000417994 673 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX3O60493 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX3O60493 AL160275.3-201ENST00000423876 471 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AL353729.1-201ENST00000425044 720 ntBASIC2.71□□□□□ -1.98
SNX3O60493 MTCO2P19-201ENST00000427513 598 ntBASIC2.71□□□□□ -1.98
SNX3O60493 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX3O60493 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX3O60493 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX3O60493 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX3O60493 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX3O60493 DPPA3P1-201ENST00000448050 469 ntBASIC2.71□□□□□ -1.98
SNX3O60493 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms