Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MTCO3P18-201ENST00000440206 761 ntBASIC2.92□□□□□ -1.94
PRKNO60260 MTND4P25-201ENST00000441039 533 ntBASIC2.92□□□□□ -1.94
PRKNO60260 CALM1P1-201ENST00000442082 433 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKNO60260 RPL31P60-201ENST00000478450 367 ntBASIC2.92□□□□□ -1.94
PRKNO60260 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.92□□□□□ -1.94
PRKNO60260 AC018710.1-201ENST00000506509 158 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.92□□□□□ -1.94
PRKNO60260 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.92□□□□□ -1.94
PRKNO60260 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.92□□□□□ -1.94
PRKNO60260 RNU6-677P-201ENST00000516914 101 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AF235103.2-201ENST00000525753 346 ntBASIC2.92□□□□□ -1.94
PRKNO60260 RANP3-201ENST00000530970 276 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AC004024.1-201ENST00000549244 247 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKNO60260 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKNO60260 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.92□□□□□ -1.94
PRKNO60260 AC008521.1-201ENST00000587471 187 ntBASIC2.92□□□□□ -1.94
PRKNO60260 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 AC130324.3-201ENST00000614165 542 ntBASIC2.92□□□□□ -1.94
PRKNO60260 ATP5A1P2-202ENST00000616464 443 ntBASIC2.92□□□□□ -1.94
PRKNO60260 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.92□□□□□ -1.94
PRKNO60260 DUXAP9-208ENST00000622815 614 ntBASIC2.92□□□□□ -1.94
PRKNO60260 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKNO60260 AL137003.2-201ENST00000606924 2538 ntBASIC2.92□□□□□ -1.94
PRKNO60260 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.92□□□□□ -1.94
PRKNO60260 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PRKNO60260 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKNO60260 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKNO60260 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.91□□□□□ -1.94
PRKNO60260 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PRKNO60260 RNU6-50P-201ENST00000362356 103 ntBASIC2.91□□□□□ -1.94
PRKNO60260 Y_RNA.160-201ENST00000363677 92 ntBASIC2.91□□□□□ -1.94
PRKNO60260 RNU6-116P-201ENST00000384042 109 ntBASIC2.91□□□□□ -1.94
PRKNO60260 SNORA7.4-201ENST00000384249 137 ntBASIC2.91□□□□□ -1.94
PRKNO60260 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PRKNO60260 AL356776.1-201ENST00000406574 447 ntBASIC2.91□□□□□ -1.94
PRKNO60260 AL606923.1-201ENST00000406616 190 ntBASIC2.91□□□□□ -1.94
PRKNO60260 RNA5SP129-201ENST00000410276 118 ntBASIC2.91□□□□□ -1.94
PRKNO60260 RNU2-29P-201ENST00000410423 189 ntBASIC2.91□□□□□ -1.94
PRKNO60260 RNA5SP31-201ENST00000411144 127 ntBASIC2.91□□□□□ -1.94
PRKNO60260 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.91□□□□□ -1.94
PRKNO60260 AC138393.2-201ENST00000414742 246 ntBASIC2.91□□□□□ -1.94
PRKNO60260 RPL7P46-201ENST00000425129 740 ntBASIC2.91□□□□□ -1.94
PRKNO60260 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKNO60260 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.91□□□□□ -1.94
PRKNO60260 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKNO60260 ELOCP23-201ENST00000452014 332 ntBASIC2.91□□□□□ -1.94
PRKNO60260 RN7SL442P-201ENST00000473804 320 ntBASIC2.91□□□□□ -1.94
PRKNO60260 MTCYBP18-201ENST00000501056 747 ntBASIC2.91□□□□□ -1.94
PRKNO60260 AC117522.3-201ENST00000507974 584 ntBASIC2.91□□□□□ -1.94
PRKNO60260 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKNO60260 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKNO60260 RNU4-29P-201ENST00000515943 174 ntBASIC2.91□□□□□ -1.94
PRKNO60260 SNORA31.3-201ENST00000516029 96 ntBASIC2.91□□□□□ -1.94
PRKNO60260 SCARNA15.2-201ENST00000516409 127 ntBASIC2.91□□□□□ -1.94
PRKNO60260 RNA5SP468-201ENST00000516782 93 ntBASIC2.91□□□□□ -1.94
PRKNO60260 SNORD60.2-201ENST00000516883 86 ntBASIC2.91□□□□□ -1.94
PRKNO60260 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKNO60260 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKNO60260 AC104027.1-201ENST00000521887 300 ntBASIC2.91□□□□□ -1.94
PRKNO60260 ADI1P3-201ENST00000549509 470 ntBASIC2.91□□□□□ -1.94
PRKNO60260 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKNO60260 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKNO60260 MIR4474-201ENST00000579189 78 ntBASIC2.91□□□□□ -1.94
PRKNO60260 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.91□□□□□ -1.94
PRKNO60260 AL670379.4-201ENST00000605279 254 ntBASIC2.91□□□□□ -1.94
PRKNO60260 AL160281.1-201ENST00000605307 311 ntBASIC2.91□□□□□ -1.94
PRKNO60260 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKNO60260 AP001486.3-201ENST00000615334 372 ntBASIC2.91□□□□□ -1.94
PRKNO60260 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKNO60260 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PRKNO60260 AC118273.1-201ENST00000525324 3006 ntBASIC2.91□□□□□ -1.94
PRKNO60260 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PRKNO60260 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.91□□□□□ -1.94
PRKNO60260 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.91□□□□□ -1.94
PRKNO60260 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.9□□□□□ -1.94
PRKNO60260 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRKNO60260 OR4G1P-203ENST00000641984 1631 ntBASIC2.9□□□□□ -1.94
PRKNO60260 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PRKNO60260 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PRKNO60260 AL139276.1-201ENST00000311910 1001 ntBASIC2.9□□□□□ -1.95
PRKNO60260 Y_RNA.86-201ENST00000363020 111 ntBASIC2.9□□□□□ -1.95
PRKNO60260 SNORA72.1-201ENST00000363485 129 ntBASIC2.9□□□□□ -1.95
PRKNO60260 RNU5E-4P-201ENST00000364931 120 ntBASIC2.9□□□□□ -1.95
PRKNO60260 RNU6-550P-201ENST00000391057 101 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AL139397.2-201ENST00000404529 772 ntBASIC2.9□□□□□ -1.95
PRKNO60260 RNA5SP111-201ENST00000411386 101 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKNO60260 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.9□□□□□ -1.95
PRKNO60260 HMGN2P20-201ENST00000437531 273 ntBASIC2.9□□□□□ -1.95
PRKNO60260 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKNO60260 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.9□□□□□ -1.95
PRKNO60260 MTND3P10-201ENST00000450967 341 ntBASIC2.9□□□□□ -1.95
PRKNO60260 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.9□□□□□ -1.95
PRKNO60260 SNRPFP3-201ENST00000457792 225 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms