Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 ELOCP31-201ENST00000540463 467 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AL163153.1-201ENST00000554223 283 ntBASIC3.68□□□□□ -1.82
PROM1O43490 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.68□□□□□ -1.82
PROM1O43490 AC120057.2-201ENST00000571520 271 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AC005951.2-201ENST00000576282 495 ntBASIC3.68□□□□□ -1.82
PROM1O43490 MIR3941-201ENST00000582572 103 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AC023043.2-201ENST00000589678 1026 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.68□□□□□ -1.82
PROM1O43490 AC174048.1-201ENST00000603389 144 ntBASIC3.68□□□□□ -1.82
PROM1O43490 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.68□□□□□ -1.82
PROM1O43490 U6.98-201ENST00000637157 84 ntBASIC3.68□□□□□ -1.82
PROM1O43490 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PROM1O43490 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.68□□□□□ -1.82
PROM1O43490 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
PROM1O43490 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.67□□□□□ -1.82
PROM1O43490 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 SNORA63.1-201ENST00000362493 131 ntBASIC3.67□□□□□ -1.82
PROM1O43490 SNORD116-11-201ENST00000383882 92 ntBASIC3.67□□□□□ -1.82
PROM1O43490 U1.1-201ENST00000384101 164 ntBASIC3.67□□□□□ -1.82
PROM1O43490 RNU6-601P-201ENST00000384540 107 ntBASIC3.67□□□□□ -1.82
PROM1O43490 MIR199A2-201ENST00000385289 110 ntBASIC3.67□□□□□ -1.82
PROM1O43490 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.67□□□□□ -1.82
PROM1O43490 RPLP0P7-201ENST00000416050 667 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.67□□□□□ -1.82
PROM1O43490 AC079780.1-201ENST00000428259 207 ntBASIC3.67□□□□□ -1.82
PROM1O43490 YME1L1P1-201ENST00000429435 297 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AL445584.1-201ENST00000431451 330 ntBASIC3.67□□□□□ -1.82
PROM1O43490 GPM6BP2-201ENST00000432046 144 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.67□□□□□ -1.82
PROM1O43490 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.67□□□□□ -1.82
PROM1O43490 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.67□□□□□ -1.82
PROM1O43490 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 GPM6BP1-201ENST00000446387 144 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AL133547.1-201ENST00000448546 220 ntBASIC3.67□□□□□ -1.82
PROM1O43490 Y_RNA.653-201ENST00000459091 95 ntBASIC3.67□□□□□ -1.82
PROM1O43490 RNU7-167P-201ENST00000459160 62 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC104472.2-201ENST00000469035 601 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.67□□□□□ -1.82
PROM1O43490 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.67□□□□□ -1.82
PROM1O43490 AC008526.1-201ENST00000509149 338 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.67□□□□□ -1.82
PROM1O43490 RNU2-69P-201ENST00000516061 100 ntBASIC3.67□□□□□ -1.82
PROM1O43490 SNORA31.22-201ENST00000517204 135 ntBASIC3.67□□□□□ -1.82
PROM1O43490 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.67□□□□□ -1.82
PROM1O43490 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.67□□□□□ -1.82
PROM1O43490 IMMP1LP2-201ENST00000552954 492 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC090115.3-201ENST00000553218 849 ntBASIC3.67□□□□□ -1.82
PROM1O43490 MIR5690-201ENST00000583739 73 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.67□□□□□ -1.82
PROM1O43490 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.67□□□□□ -1.82
PROM1O43490 AL606490.9-201ENST00000603331 271 ntBASIC3.67□□□□□ -1.82
PROM1O43490 SNRPGP17-201ENST00000603780 214 ntBASIC3.67□□□□□ -1.82
PROM1O43490 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC069200.1-201ENST00000609511 323 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AL355365.1-201ENST00000616480 294 ntBASIC3.67□□□□□ -1.82
PROM1O43490 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AC244517.12-201ENST00000623581 663 ntBASIC3.67□□□□□ -1.82
PROM1O43490 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.67□□□□□ -1.82
PROM1O43490 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
PROM1O43490 MTND5P42-201ENST00000637720 498 ntBASIC3.67□□□□□ -1.82
PROM1O43490 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PROM1O43490 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.67□□□□□ -1.82
PROM1O43490 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PROM1O43490 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PROM1O43490 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PROM1O43490 HSPA8P4-201ENST00000511877 1920 ntBASIC3.66□□□□□ -1.82
PROM1O43490 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.66□□□□□ -1.82
PROM1O43490 RNA5SP97-201ENST00000365006 84 ntBASIC3.66□□□□□ -1.82
PROM1O43490 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PROM1O43490 AC245054.2-201ENST00000415639 319 ntBASIC3.66□□□□□ -1.82
PROM1O43490 RPL7P10-201ENST00000417407 739 ntBASIC3.66□□□□□ -1.82
PROM1O43490 Z82205.1-201ENST00000428456 297 ntBASIC3.66□□□□□ -1.82
PROM1O43490 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.66□□□□□ -1.82
PROM1O43490 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.66□□□□□ -1.82
PROM1O43490 PRSS3P4-201ENST00000453323 162 ntBASIC3.66□□□□□ -1.82
PROM1O43490 SNORA14.1-201ENST00000516113 141 ntBASIC3.66□□□□□ -1.82
PROM1O43490 RNA5SP164-201ENST00000516533 110 ntBASIC3.66□□□□□ -1.82
PROM1O43490 RN7SKP258-201ENST00000517151 304 ntBASIC3.66□□□□□ -1.82
PROM1O43490 RNU6-323P-201ENST00000521915 107 ntBASIC3.66□□□□□ -1.82
PROM1O43490 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.66□□□□□ -1.82
PROM1O43490 HSPE1P5-201ENST00000561489 272 ntBASIC3.66□□□□□ -1.82
PROM1O43490 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.66□□□□□ -1.82
PROM1O43490 MIR5692C1-201ENST00000585309 91 ntBASIC3.66□□□□□ -1.82
PROM1O43490 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.66□□□□□ -1.82
PROM1O43490 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.66□□□□□ -1.82
PROM1O43490 AC016925.2-201ENST00000605108 242 ntBASIC3.66□□□□□ -1.82
PROM1O43490 AL138726.1-201ENST00000614873 333 ntBASIC3.66□□□□□ -1.82
PROM1O43490 AC015967.1-201ENST00000619893 476 ntBASIC3.66□□□□□ -1.82
PROM1O43490 AL353748.2-201ENST00000622148 471 ntBASIC3.66□□□□□ -1.82
PROM1O43490 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.66□□□□□ -1.82
PROM1O43490 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.66□□□□□ -1.82
PROM1O43490 AC012442.3-202ENST00000636742 206 ntBASIC3.66□□□□□ -1.82
PROM1O43490 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms