Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MT-TG-201ENST00000387429 68 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AC009310.1-201ENST00000414414 451 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AC092447.6-201ENST00000414578 210 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.48□□□□□ -1.69
SRGAP3O43295 DBIP2-201ENST00000419076 262 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 RPL7P37-201ENST00000425095 738 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AL353597.2-202ENST00000434901 373 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AC010631.1-201ENST00000474150 156 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.48□□□□□ -1.69
SRGAP3O43295 MTND4LP22-201ENST00000508209 276 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 MRPS35P2-201ENST00000508242 191 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.48□□□□□ -1.69
SRGAP3O43295 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.48□□□□□ -1.69
SRGAP3O43295 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.48□□□□□ -1.69
SRGAP3O43295 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.48□□□□□ -1.69
SRGAP3O43295 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.48□□□□□ -1.69
SRGAP3O43295 MIR4429-201ENST00000580105 73 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.48□□□□□ -1.69
SRGAP3O43295 NUTF2P8-201ENST00000604593 363 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AC006077.1-201ENST00000604746 343 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 AP001005.3-201ENST00000622049 129 ntBASIC4.48□□□□□ -1.69
SRGAP3O43295 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.48□□□□□ -1.69
SRGAP3O43295 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.48□□□□□ -1.69
SRGAP3O43295 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRGAP3O43295 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.48□□□□□ -1.69
SRGAP3O43295 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SRGAP3O43295 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.47□□□□□ -1.69
SRGAP3O43295 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.47□□□□□ -1.69
SRGAP3O43295 Y_RNA.496-201ENST00000384444 101 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 RNU6-821P-201ENST00000390995 107 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 RPS4XP7-201ENST00000406274 780 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 AC008267.5-201ENST00000424928 265 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 PSMA2P3-201ENST00000429685 675 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.47□□□□□ -1.69
SRGAP3O43295 MRPS18BP2-201ENST00000434310 759 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 GAPDHP27-201ENST00000447427 1020 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.47□□□□□ -1.69
SRGAP3O43295 SNORD105B-201ENST00000458770 79 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 snoU109.4-201ENST00000458953 143 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 U8.20-201ENST00000459445 131 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 RN7SL283P-201ENST00000489055 303 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 RPL21P129-201ENST00000491732 478 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 RNU6-470P-201ENST00000515954 104 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 RNU2-69P-201ENST00000516061 100 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 MIR3922-201ENST00000585192 84 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 AC006254.3-201ENST00000603353 884 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 IGHV3-29-201ENST00000604817 344 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 SNORA51-201ENST00000606420 132 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SRGAP3O43295 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.47□□□□□ -1.69
SRGAP3O43295 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SRGAP3O43295 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SRGAP3O43295 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRGAP3O43295 AC074029.4-201ENST00000624796 1859 ntBASIC4.47□□□□□ -1.69
SRGAP3O43295 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SRGAP3O43295 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SRGAP3O43295 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.46□□□□□ -1.7
SRGAP3O43295 Y_RNA.153-201ENST00000363615 91 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRGAP3O43295 Y_RNA.399-201ENST00000383955 105 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 RNU6-190P-201ENST00000384154 102 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 AC093151.1-201ENST00000427711 313 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SRGAP3O43295 RPL23AP50-201ENST00000434149 455 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.46□□□□□ -1.7
SRGAP3O43295 HSPD1P21-201ENST00000436541 245 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 CYCSP43-201ENST00000438233 310 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.46□□□□□ -1.7
SRGAP3O43295 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.46□□□□□ -1.7
SRGAP3O43295 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.46□□□□□ -1.7
SRGAP3O43295 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.46□□□□□ -1.7
SRGAP3O43295 HIGD1AP3-201ENST00000515857 278 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 RNU6-120P-201ENST00000516077 103 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 AC103783.1-201ENST00000520506 373 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 MYL12BP1-201ENST00000569826 507 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 AC113195.1-201ENST00000579952 141 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 AL355812.1-201ENST00000603215 216 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 AL034351.1-201ENST00000605288 668 ntBASIC4.46□□□□□ -1.7
SRGAP3O43295 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.46□□□□□ -1.7
SRGAP3O43295 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.46□□□□□ -1.7
SRGAP3O43295 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SRGAP3O43295 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
SRGAP3O43295 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRGAP3O43295 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRGAP3O43295 HSPA8P1-201ENST00000425843 1833 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 MIR423-201ENST00000362201 94 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 RNU6-490P-201ENST00000362985 107 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 Y_RNA.80-201ENST00000362996 102 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 RNA5SP42-201ENST00000364278 115 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 RNU6-99P-201ENST00000364721 107 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 Y_RNA.389-201ENST00000383924 113 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 Y_RNA.428-201ENST00000384078 102 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 CYP4F29P-201ENST00000420685 446 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 CYCSP4-201ENST00000429682 331 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 RPL23AP69-201ENST00000431134 458 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.45□□□□□ -1.7
SRGAP3O43295 HIGD1AP11-201ENST00000438361 280 ntBASIC4.45□□□□□ -1.7
SRGAP3O43295 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms