Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR4275-201ENST00000636486 87 ntBASIC2.92□□□□□ -1.94
CUX2O14529 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CUX2O14529 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CUX2O14529 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CUX2O14529 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CUX2O14529 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.92□□□□□ -1.94
CUX2O14529 Y_RNA.234-201ENST00000364409 97 ntBASIC2.91□□□□□ -1.94
CUX2O14529 Y_RNA.251-201ENST00000364551 99 ntBASIC2.91□□□□□ -1.94
CUX2O14529 RNU6-906P-201ENST00000384700 70 ntBASIC2.91□□□□□ -1.94
CUX2O14529 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CUX2O14529 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.91□□□□□ -1.94
CUX2O14529 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.91□□□□□ -1.94
CUX2O14529 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.91□□□□□ -1.94
CUX2O14529 BX119904.4-201ENST00000424402 301 ntBASIC2.91□□□□□ -1.94
CUX2O14529 RPL7L1P10-201ENST00000427790 463 ntBASIC2.91□□□□□ -1.94
CUX2O14529 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.91□□□□□ -1.94
CUX2O14529 AC004854.1-201ENST00000440356 349 ntBASIC2.91□□□□□ -1.94
CUX2O14529 MTND3P1-201ENST00000441336 220 ntBASIC2.91□□□□□ -1.94
CUX2O14529 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.91□□□□□ -1.94
CUX2O14529 AL009048.1-201ENST00000450437 298 ntBASIC2.91□□□□□ -1.94
CUX2O14529 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.91□□□□□ -1.94
CUX2O14529 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.91□□□□□ -1.94
CUX2O14529 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.91□□□□□ -1.94
CUX2O14529 RPS29P1-201ENST00000465274 159 ntBASIC2.91□□□□□ -1.94
CUX2O14529 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.91□□□□□ -1.94
CUX2O14529 AF131216.2-201ENST00000512316 564 ntBASIC2.91□□□□□ -1.94
CUX2O14529 GLUD1P4-201ENST00000590914 418 ntBASIC2.91□□□□□ -1.94
CUX2O14529 RPL23AP88-201ENST00000605759 454 ntBASIC2.91□□□□□ -1.94
CUX2O14529 RNU6-88P-201ENST00000606801 100 ntBASIC2.91□□□□□ -1.94
CUX2O14529 AC106052.1-201ENST00000608029 497 ntBASIC2.91□□□□□ -1.94
CUX2O14529 AP000254.1-201ENST00000609934 520 ntBASIC2.91□□□□□ -1.94
CUX2O14529 AC006386.1-201ENST00000619436 415 ntBASIC2.91□□□□□ -1.94
CUX2O14529 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.91□□□□□ -1.94
CUX2O14529 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CUX2O14529 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CUX2O14529 RNU6-621P-201ENST00000364752 109 ntBASIC2.9□□□□□ -1.94
CUX2O14529 RNU6-637P-201ENST00000384050 107 ntBASIC2.9□□□□□ -1.94
CUX2O14529 RNU6-1032P-201ENST00000384100 107 ntBASIC2.9□□□□□ -1.94
CUX2O14529 RNU6-1242P-201ENST00000391052 103 ntBASIC2.9□□□□□ -1.94
CUX2O14529 MTND1P21-201ENST00000412991 285 ntBASIC2.9□□□□□ -1.94
CUX2O14529 AC008850.1-201ENST00000427546 362 ntBASIC2.9□□□□□ -1.94
CUX2O14529 RPS25P9-201ENST00000435591 252 ntBASIC2.9□□□□□ -1.94
CUX2O14529 EEF1E1P1-201ENST00000446998 430 ntBASIC2.9□□□□□ -1.94
CUX2O14529 SNRPGP6-201ENST00000451124 220 ntBASIC2.9□□□□□ -1.94
CUX2O14529 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.9□□□□□ -1.94
CUX2O14529 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.9□□□□□ -1.94
CUX2O14529 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.9□□□□□ -1.94
CUX2O14529 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.9□□□□□ -1.94
CUX2O14529 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.9□□□□□ -1.94
CUX2O14529 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.9□□□□□ -1.94
CUX2O14529 SNORA31.22-201ENST00000517204 135 ntBASIC2.9□□□□□ -1.94
CUX2O14529 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.94
CUX2O14529 AC239860.2-201ENST00000525886 270 ntBASIC2.9□□□□□ -1.94
CUX2O14529 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.9□□□□□ -1.94
CUX2O14529 MTND1P8-201ENST00000571424 950 ntBASIC2.9□□□□□ -1.94
CUX2O14529 SNORD53B-201ENST00000577887 78 ntBASIC2.9□□□□□ -1.94
CUX2O14529 MIR3609-201ENST00000582661 80 ntBASIC2.9□□□□□ -1.94
CUX2O14529 AC080013.3-201ENST00000606839 578 ntBASIC2.9□□□□□ -1.94
CUX2O14529 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.9□□□□□ -1.94
CUX2O14529 AC009974.1-201ENST00000608881 455 ntBASIC2.9□□□□□ -1.94
CUX2O14529 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CUX2O14529 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.9□□□□□ -1.94
CUX2O14529 DDX43P2-201ENST00000604753 1354 ntBASIC2.9□□□□□ -1.94
CUX2O14529 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CUX2O14529 RNU6-799P-201ENST00000363567 107 ntBASIC2.9□□□□□ -1.95
CUX2O14529 Y_RNA.548-201ENST00000384656 105 ntBASIC2.9□□□□□ -1.95
CUX2O14529 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CUX2O14529 RNU6-516P-201ENST00000411381 104 ntBASIC2.9□□□□□ -1.95
CUX2O14529 AC083875.1-201ENST00000419509 405 ntBASIC2.9□□□□□ -1.95
CUX2O14529 PPP1R11P2-201ENST00000423543 382 ntBASIC2.9□□□□□ -1.95
CUX2O14529 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.9□□□□□ -1.95
CUX2O14529 AC090255.1-201ENST00000495779 349 ntBASIC2.9□□□□□ -1.95
CUX2O14529 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.9□□□□□ -1.95
CUX2O14529 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.9□□□□□ -1.95
CUX2O14529 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CUX2O14529 ACTR3BP3-201ENST00000565577 979 ntBASIC2.9□□□□□ -1.95
CUX2O14529 AL592221.1-201ENST00000605266 382 ntBASIC2.9□□□□□ -1.95
CUX2O14529 AL158042.1-201ENST00000605338 460 ntBASIC2.9□□□□□ -1.95
CUX2O14529 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.9□□□□□ -1.95
CUX2O14529 AC009268.2-201ENST00000621925 457 ntBASIC2.9□□□□□ -1.95
CUX2O14529 AC019226.1-201ENST00000625666 515 ntBASIC2.9□□□□□ -1.95
CUX2O14529 AP000776.1-201ENST00000530032 1663 ntBASIC2.9□□□□□ -1.95
CUX2O14529 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.89□□□□□ -1.95
CUX2O14529 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CUX2O14529 RNU1-42P-201ENST00000364033 160 ntBASIC2.89□□□□□ -1.95
CUX2O14529 RNU6-174P-201ENST00000410406 106 ntBASIC2.89□□□□□ -1.95
CUX2O14529 AL590383.1-201ENST00000428602 75 ntBASIC2.89□□□□□ -1.95
CUX2O14529 AC084290.1-201ENST00000434995 374 ntBASIC2.89□□□□□ -1.95
CUX2O14529 RNU6-420P-201ENST00000458780 107 ntBASIC2.89□□□□□ -1.95
CUX2O14529 RPS20P20-201ENST00000460498 340 ntBASIC2.89□□□□□ -1.95
CUX2O14529 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.89□□□□□ -1.95
CUX2O14529 AC010587.2-201ENST00000511727 448 ntBASIC2.89□□□□□ -1.95
CUX2O14529 Y_RNA.681-201ENST00000516445 113 ntBASIC2.89□□□□□ -1.95
CUX2O14529 RNU6-798P-201ENST00000516912 103 ntBASIC2.89□□□□□ -1.95
CUX2O14529 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CUX2O14529 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.89□□□□□ -1.95
CUX2O14529 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.89□□□□□ -1.95
CUX2O14529 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.89□□□□□ -1.95
CUX2O14529 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.89□□□□□ -1.95
CUX2O14529 AL031274.2-201ENST00000599419 203 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms