Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 HMGN2P10-201ENST00000448085 265 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 MTND1P31-201ENST00000449206 961 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AP001324.2-201ENST00000461163 319 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SDCBPO00560 AC021382.1-201ENST00000483523 359 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.28□□□□□ -2.2
SDCBPO00560 SMURF2P1-201ENST00000514992 481 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 SNORA25.11-201ENST00000515935 105 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 RNU6-1225P-201ENST00000516336 65 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 Y_RNA.675-201ENST00000516389 149 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 RNA5SP165-201ENST00000517142 115 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.28□□□□□ -2.2
SDCBPO00560 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.28□□□□□ -2.2
SDCBPO00560 AC107953.1-201ENST00000522216 297 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.28□□□□□ -2.2
SDCBPO00560 AC104417.1-201ENST00000523974 751 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.28□□□□□ -2.2
SDCBPO00560 AP005639.2-201ENST00000527592 928 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 OR6C7P-201ENST00000547875 934 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.28□□□□□ -2.2
SDCBPO00560 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.28□□□□□ -2.2
SDCBPO00560 AC023825.1-201ENST00000566704 1030 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 MIR4255-201ENST00000579351 72 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.28□□□□□ -2.2
SDCBPO00560 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.28□□□□□ -2.2
SDCBPO00560 AP001269.3-201ENST00000588718 329 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 VN1R87P-201ENST00000596706 487 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AL158827.2-201ENST00000602494 330 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 BBIP1P1-201ENST00000602999 279 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AC023158.2-201ENST00000614876 543 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.28□□□□□ -2.2
SDCBPO00560 AL691447.3-201ENST00000635020 330 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 MIR3199-2-201ENST00000636243 86 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 AC099063.3-201ENST00000642066 185 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 MTND5P30-201ENST00000452896 1731 ntBASIC1.28□□□□□ -2.2
SDCBPO00560 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.28□□□□□ -2.2
SDCBPO00560 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SDCBPO00560 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SDCBPO00560 RNU6-97P-201ENST00000363387 104 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 RNU5B-4P-201ENST00000363508 111 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 U3.13-201ENST00000364804 214 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.27□□□□□ -2.21
SDCBPO00560 AL590084.2-201ENST00000401481 382 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 MIR1261-201ENST00000408659 82 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 RNA5SP450-201ENST00000411206 102 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 RNU6-516P-201ENST00000411381 104 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.27□□□□□ -2.21
SDCBPO00560 AC007435.1-201ENST00000421086 415 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AL513185.2-201ENST00000425543 193 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AL445669.1-201ENST00000426743 755 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 MTND5P14-201ENST00000441481 1267 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.27□□□□□ -2.21
SDCBPO00560 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SDCBPO00560 AC104685.1-201ENST00000502445 371 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 MRPS33P3-201ENST00000513456 322 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AP004607.1-201ENST00000524456 203 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 AC087897.1-201ENST00000550134 156 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 MIR3683-201ENST00000580847 82 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AL353997.4-201ENST00000586196 166 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AC073544.2-201ENST00000601155 540 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 DPPA3P3-201ENST00000603842 430 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AC005034.5-201ENST00000604219 466 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AL512506.1-201ENST00000613918 449 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 AL773524.1-201ENST00000614065 229 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.27□□□□□ -2.21
SDCBPO00560 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.27□□□□□ -2.21
SDCBPO00560 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SDCBPO00560 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.26□□□□□ -2.21
SDCBPO00560 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SDCBPO00560 RNU1-42P-201ENST00000364033 160 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 Y_RNA.245-201ENST00000364493 95 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 RNA5SP190-201ENST00000365222 118 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 UBE2FP1-201ENST00000416536 447 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.26□□□□□ -2.21
SDCBPO00560 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AL161651.1-201ENST00000440882 223 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC010095.1-201ENST00000443543 144 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 MTCYBP42-201ENST00000444653 1130 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 ARPC3P5-201ENST00000448802 534 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.26□□□□□ -2.21
SDCBPO00560 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.26□□□□□ -2.21
SDCBPO00560 snoU109.1-201ENST00000459339 135 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.26□□□□□ -2.21
SDCBPO00560 AC096745.1-201ENST00000509945 370 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 SNORD19.2-201ENST00000516978 73 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.26□□□□□ -2.21
SDCBPO00560 EEF1A1P37-201ENST00000522748 715 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 OR8K2P-201ENST00000524645 927 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 OR5AL2P-201ENST00000532185 920 ntBASIC1.26□□□□□ -2.21
SDCBPO00560 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms