Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNA5SP111-201ENST00000411386 101 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 AC096649.2-201ENST00000416186 393 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC188H7C350 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC188H7C350 MTND2P4-201ENST00000445034 1004 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 GAPDHP17-201ENST00000449858 1001 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 SNORD42A-201ENST00000459584 64 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 RAP1BP2-201ENST00000478270 544 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.82□□□□□ -1.96
CCDC188H7C350 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC188H7C350 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC188H7C350 AC113155.1-201ENST00000511141 769 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC188H7C350 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC188H7C350 RNU6-572P-201ENST00000516724 80 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 RNU6-56P-201ENST00000516986 93 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.82□□□□□ -1.96
CCDC188H7C350 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC188H7C350 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.82□□□□□ -1.96
CCDC188H7C350 Z69908.1-201ENST00000622603 247 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 U2.21-201ENST00000637295 81 ntBASIC2.82□□□□□ -1.96
CCDC188H7C350 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC188H7C350 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC188H7C350 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CCDC188H7C350 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC188H7C350 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC188H7C350 MIR6073-201ENST00000352083 89 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 RNU6-179P-201ENST00000363350 107 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 RNU6-1180P-201ENST00000364935 107 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 DEFA7P-201ENST00000382676 285 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 RNU6-750P-201ENST00000390946 107 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 UBE2V1P2-201ENST00000397758 440 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL356057.2-201ENST00000403318 432 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 C1DP2-201ENST00000418167 426 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC022018.1-201ENST00000430685 241 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC112220.1-201ENST00000434628 355 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC098831.1-201ENST00000440661 216 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC188H7C350 DPPA3P1-201ENST00000448050 469 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 MTATP6P7-201ENST00000453315 681 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 RNU6-956P-201ENST00000458868 103 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 SRIP1-201ENST00000489235 288 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 RNU6-123P-201ENST00000516163 102 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 RNU6-410P-201ENST00000517006 107 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 RNU6-1220P-201ENST00000517126 108 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AP003122.3-201ENST00000526316 255 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 COX6CP5-201ENST00000527162 228 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AC084851.1-201ENST00000529105 249 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 OR5B19P-201ENST00000531766 928 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AL121821.2-201ENST00000556081 394 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL157871.3-201ENST00000557231 293 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC103810.1-201ENST00000579873 453 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC090578.1-201ENST00000604955 591 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AL139286.2-201ENST00000606838 396 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 MIR15A-201ENST00000607334 83 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AC012409.4-201ENST00000612923 249 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 AC022079.1-201ENST00000621546 602 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 SCARNA15.3-201ENST00000626315 122 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 SCARNA4.1-201ENST00000628597 123 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC188H7C350 AC010889.1-201ENST00000566193 2666 ntBASIC2.81□□□□□ -1.96
CCDC188H7C350 TEX21P-201ENST00000447107 1476 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC188H7C350 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC188H7C350 Y_RNA.33-201ENST00000362591 102 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 MIR147B-201ENST00000390185 80 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 CISD1P1-201ENST00000393907 327 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AL109913.1-201ENST00000421173 514 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AP000936.2-201ENST00000447151 681 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AL590639.1-201ENST00000456484 337 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC188H7C350 RPL23AP70-201ENST00000483361 460 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC188H7C350 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC188H7C350 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC188H7C350 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AC025755.1-201ENST00000521306 278 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.8□□□□□ -1.96
CCDC188H7C350 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC188H7C350 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms