Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 PTGES3P1-201ENST00000439531 483 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 GDI2P2-201ENST00000445131 608 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC004223.1-201ENST00000479840 271 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 RPL36AP48-201ENST00000485521 314 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC092902.1-201ENST00000486999 259 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 RPL36AP21-201ENST00000490372 323 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORA25.11-201ENST00000515935 105 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC079598.5-201ENST00000547460 117 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AL161670.1-201ENST00000554348 137 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC136932.1-201ENST00000574771 208 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR4255-201ENST00000579351 72 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC103987.3-201ENST00000582071 292 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC073544.2-201ENST00000601155 540 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC009950.2-201ENST00000636548 183 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 ICE2P2-201ENST00000483823 2787 ntBASIC0.52□□□□□ -2.33
CHKB-CPT1BH3BT56 AC008163.1-202ENST00000636004 2889 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 HSBP1P2-201ENST00000299671 229 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORD114-2-201ENST00000363953 78 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU2-48P-201ENST00000410694 191 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC069282.1-201ENST00000411911 526 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 TPMTP3-201ENST00000411928 735 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 CCDC58P2-201ENST00000417131 366 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AL353621.1-201ENST00000418219 243 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 PTGES3P4-201ENST00000426243 356 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC008850.1-201ENST00000427546 362 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC245102.2-201ENST00000448956 180 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC068587.2-201ENST00000478386 781 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORA31.17-201ENST00000516953 127 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC079148.1-201ENST00000565944 819 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR4700-201ENST00000578311 74 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC211469.2-201ENST00000605461 205 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 NDUFA8P1-201ENST00000605525 367 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AL136313.1-201ENST00000624804 202 ntBASIC0.51□□□□□ -2.33
CHKB-CPT1BH3BT56 AC092125.1-201ENST00000562568 1995 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR449A-201ENST00000362113 91 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORA80A-201ENST00000363922 136 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU4-13P-201ENST00000364019 141 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RNU6-968P-201ENST00000384076 107 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORD14D-201ENST00000384390 87 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 SNORA48.2-201ENST00000390926 124 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RN7SKP284-201ENST00000411002 343 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RN7SKP192-201ENST00000411291 327 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RNA5SP508-201ENST00000411327 119 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RPL26P27-201ENST00000414397 437 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RPL21P90-201ENST00000415692 466 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AL606490.4-201ENST00000423117 127 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 FAM204CP-201ENST00000424489 642 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 PSMA6P3-201ENST00000428242 164 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 NANOGP2-201ENST00000435391 727 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AL353706.1-201ENST00000436728 494 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 H2AFZP6-201ENST00000444403 394 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 DUXAP8-207ENST00000456786 622 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 RPL21P47-201ENST00000483696 477 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR4661-201ENST00000582720 75 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AC023043.2-201ENST00000589678 1026 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AP001542.2-201ENST00000593141 364 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 GAS5-AS1-201ENST00000602767 694 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 BBIP1P1-201ENST00000602999 279 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AC107075.1-201ENST00000613695 314 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AC013476.2-201ENST00000614456 459 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AC073569.3-201ENST00000619055 682 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AC004777.1-201ENST00000624317 287 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AC002543.1-201ENST00000299783 1954 ntBASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
CHKB-CPT1BH3BT56 AL138713.1-201ENST00000624026 2130 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR515-2-201ENST00000384883 83 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 MIR515-1-201ENST00000384884 83 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 SNRPEP9-201ENST00000436794 238 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 MEMO1P3-201ENST00000459811 302 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 RPS20P20-201ENST00000460498 340 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 RPL31P50-201ENST00000471002 296 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 UBL5P3-201ENST00000475112 231 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 AC010409.1-201ENST00000487382 476 ntBASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.49□□□□□ -2.33
CHKB-CPT1BH3BT56 ARL2BPP5-201ENST00000523141 481 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms