Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 CDC42P4-201ENST00000510507 563 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AC112198.4-201ENST00000515450 351 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 NBEAP1-201ENST00000554452 979 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 TMF1P1-201ENST00000576058 373 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 GLUD1P4-201ENST00000590914 418 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 BNIP3P27-201ENST00000599991 412 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL139344.1-201ENST00000605228 195 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.17□□□□□ -2.22
COL6A6A6NMZ7 AL513185.3-201ENST00000433335 1300 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 Y_RNA.68-201ENST00000362881 102 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 RNU5B-1-201ENST00000363286 116 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 RNU6-461P-201ENST00000364195 107 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 Y_RNA.302-201ENST00000364997 102 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 RNU6-754P-201ENST00000391166 107 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 MIR320C1-201ENST00000408566 88 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 RNU6-1077P-201ENST00000410506 102 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AL592310.1-201ENST00000414330 671 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC083875.1-201ENST00000419509 405 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 PSMA6P3-201ENST00000428242 164 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 IFNA20P-201ENST00000436840 528 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 MTCO2P25-201ENST00000447065 681 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 Z82190.1-201ENST00000454534 490 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC024619.4-201ENST00000580924 316 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC015688.2-201ENST00000584523 262 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 RPS15AP11-201ENST00000594193 385 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC004987.4-201ENST00000603383 338 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AL357094.1-201ENST00000603845 844 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC021749.1-201ENST00000604322 607 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC004853.1-201ENST00000604902 698 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AL133507.1-201ENST00000605269 557 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC009237.15-201ENST00000610252 501 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AC006386.1-201ENST00000619436 415 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 AL360181.4-201ENST00000621752 134 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 CENPCP1-201ENST00000533085 2578 ntBASIC1.16□□□□□ -2.22
COL6A6A6NMZ7 RNU6-359P-201ENST00000365466 108 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 RNU6-1122P-201ENST00000384449 107 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 MIR193B-201ENST00000384907 83 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AL139098.1-201ENST00000407291 389 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 RNU4-72P-201ENST00000410754 173 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 RNU2-40P-201ENST00000410833 196 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC012497.1-201ENST00000429392 575 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 CR769776.1-201ENST00000441254 787 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 COX6CP18-201ENST00000448769 222 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 RPL18AP17-201ENST00000455326 198 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 RNY4P37-201ENST00000516225 96 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 RNU6-714P-201ENST00000516963 103 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC025755.1-201ENST00000521306 278 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AP005435.4-201ENST00000529514 284 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC090666.1-201ENST00000578241 445 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 DUXAP10-204ENST00000612052 616 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC011939.3-201ENST00000613686 466 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC027309.3-201ENST00000623419 351 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AL354685.2-201ENST00000448218 1447 ntBASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.15□□□□□ -2.22
COL6A6A6NMZ7 AC087359.1-201ENST00000508335 1740 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 RNU6-989P-201ENST00000362756 107 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 Y_RNA.192-201ENST00000363977 102 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 RNU6-115P-201ENST00000364310 107 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 Y_RNA.548-201ENST00000384656 105 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 RNU6-997P-201ENST00000384725 107 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AL356131.1-201ENST00000405826 414 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 U3.40-201ENST00000408706 208 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 MTATP6P20-201ENST00000414147 562 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC007742.1-201ENST00000425789 329 ntBASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.15□□□□□ -2.23
COL6A6A6NMZ7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms