Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC012213.4-201ENST00000606457 354 ntBASIC0.23□□□□□ -2.37
LINC01549A6NIU2 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01549A6NIU2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.23□□□□□ -2.37
LINC01549A6NIU2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 DEFB108F-201ENST00000344638 222 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 RNU6-439P-201ENST00000384188 106 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 CBX3P6-201ENST00000430257 527 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 MTND2P19-201ENST00000449129 1012 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AC108059.3-201ENST00000456388 214 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AC025465.3-201ENST00000510570 311 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 RN7SKP265-201ENST00000516448 223 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AC005786.1-201ENST00000588553 154 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AL022345.2-201ENST00000606307 135 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AC097504.2-201ENST00000608088 454 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AC024581.2-201ENST00000619986 252 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 AL133216.2-202ENST00000634512 349 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 MIR5087-201ENST00000635826 76 ntBASIC0.22□□□□□ -2.37
LINC01549A6NIU2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
LINC01549A6NIU2 U3.8-201ENST00000363675 217 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 RNU6-244P-201ENST00000391028 104 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 NPM1P10-201ENST00000398310 865 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 MTCO1P44-201ENST00000441935 243 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 OR9N1P-202ENST00000494289 481 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 TRBVA-201ENST00000498804 316 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 CYP3A137P-201ENST00000562436 69 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AC002400.1-201ENST00000569310 726 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AC009233.1-201ENST00000616477 371 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AL118508.4-201ENST00000624142 1176 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AC099654.5-201ENST00000636479 350 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.21□□□□□ -2.38
LINC01549A6NIU2 MTND5P30-201ENST00000452896 1731 ntBASIC0.21□□□□□ -2.38
LINC01549A6NIU2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 TAF9BP2-201ENST00000400856 499 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 MTND4LP20-201ENST00000402379 270 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AC027119.1-201ENST00000440877 241 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AL137159.1-201ENST00000452808 512 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AC244505.3-201ENST00000454598 187 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 CYP2C59P-201ENST00000457790 269 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 TOMM22P6-201ENST00000465035 409 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AC006518.2-201ENST00000542513 940 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 HSPE1P4-201ENST00000550617 308 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AL391261.3-201ENST00000557194 520 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AC008751.2-201ENST00000597885 980 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AL121652.1-201ENST00000608851 448 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 AC012360.2-201ENST00000609349 391 ntBASIC0.2□□□□□ -2.38
LINC01549A6NIU2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.2□□□□□ -2.38
LINC01549A6NIU2 MIR302D-201ENST00000362275 68 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 RNU6-821P-201ENST00000390995 107 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AP000275.1-201ENST00000411943 390 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 RPS26P5-201ENST00000418544 335 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.19□□□□□ -2.38
LINC01549A6NIU2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.19□□□□□ -2.38
LINC01549A6NIU2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AL358794.1-201ENST00000445689 381 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 COX6CP6-201ENST00000490840 228 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AC138853.1-201ENST00000503549 823 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AC006390.1-201ENST00000508068 283 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 RNA5SP384-201ENST00000516615 116 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AC011604.1-201ENST00000545978 196 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AC087897.1-201ENST00000550134 156 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.19□□□□□ -2.38
LINC01549A6NIU2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AF131215.7-201ENST00000602443 707 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AP000942.3-201ENST00000603702 160 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 BNIP3P19-201ENST00000605397 577 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AC015849.6-201ENST00000605454 474 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 BX284668.6-201ENST00000606899 438 ntBASIC0.19□□□□□ -2.38
LINC01549A6NIU2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.19□□□□□ -2.38
LINC01549A6NIU2 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 RNA5SP499-201ENST00000363982 119 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
LINC01549A6NIU2 AC096649.2-201ENST00000416186 393 ntBASIC0.18□□□□□ -2.38
LINC01549A6NIU2 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms