Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC009961.3-201ENST00000449832 765 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 CECR9-201ENST00000453421 199 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC022447.1-201ENST00000515358 464 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 SNORA31.1-201ENST00000515993 133 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 SNORA31.5-201ENST00000516190 133 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 Y_RNA.688-201ENST00000516565 95 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 IGKV3-31-201ENST00000523109 329 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC009163.5-201ENST00000575421 637 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 MIR4648-201ENST00000580107 72 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 RPL23AP78-201ENST00000599928 470 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 Z94722.1-201ENST00000604328 474 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC007363.1-201ENST00000604736 620 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC090970.3-201ENST00000612566 866 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC013476.2-201ENST00000614456 459 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 MIR6076-201ENST00000617521 113 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 AC025048.6-202ENST00000627667 438 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 FO624990.1-201ENST00000636373 85 ntBASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV40A0A0B4J280 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-288P-201ENST00000363690 104 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 RNY4P34-201ENST00000364779 95 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 U8.8-201ENST00000365399 135 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 SNORD116-2-201ENST00000384274 95 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 SNORD116-1-201ENST00000384335 95 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 SNORD116-6-201ENST00000384711 96 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 RNY3P10-201ENST00000384764 102 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 SNORA40.3-201ENST00000390964 122 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL513331.1-201ENST00000411908 397 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 ELOCP17-201ENST00000414751 326 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC114491.1-201ENST00000416095 246 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 SPA17P1-201ENST00000416656 452 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC092047.1-201ENST00000424997 240 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 SNRPEP4-201ENST00000435815 279 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 MTND6P13-201ENST00000443510 523 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 MTCYBP1-201ENST00000454315 1119 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC133134.1-201ENST00000466800 359 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 RBM43P1-201ENST00000476891 1081 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC139453.3-201ENST00000493276 369 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC105252.1-201ENST00000503089 286 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AIG1P1-201ENST00000503376 148 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC117522.2-201ENST00000510049 657 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 CDC42P4-201ENST00000510507 563 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL356057.1-201ENST00000533798 831 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AMZ2P1-203ENST00000565833 850 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 MIR4446-201ENST00000578505 67 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 MIR5007-201ENST00000583098 95 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC005771.1-201ENST00000585581 349 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 GLUD1P4-201ENST00000590914 418 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC002545.1-201ENST00000592511 181 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL049779.4-201ENST00000604500 156 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL136363.1-201ENST00000605349 337 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC012360.2-201ENST00000609349 391 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC008250.2-201ENST00000615261 205 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL589994.2-201ENST00000621124 579 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 Z69908.1-201ENST00000622603 247 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL136164.4-201ENST00000625013 2135 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AC090740.1-201ENST00000623193 2262 ntBASIC1.86□□□□□ -2.11
TRAV40A0A0B4J280 AL049641.1-201ENST00000441055 1948 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 RNU1-51P-201ENST00000365345 176 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 Y_RNA.359-201ENST00000365498 102 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-348P-201ENST00000384386 107 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 RNY3P9-201ENST00000384727 106 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-278P-201ENST00000390945 109 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 RNU6-248P-201ENST00000410720 107 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 RPS3AP3-201ENST00000411933 242 ntBASIC1.85□□□□□ -2.11
TRAV40A0A0B4J280 HMGN1P14-201ENST00000412459 517 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms